Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.68□□□□□ -0.06
SPENQ96T58 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.68□□□□□ -0.06
SPENQ96T58 AC068587.10-201ENST00000641210 219 ntBASIC14.68□□□□□ -0.06
SPENQ96T58 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.68□□□□□ -0.06
SPENQ96T58 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPENQ96T58 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPENQ96T58 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SPENQ96T58 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.68□□□□□ -0.06
SPENQ96T58 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SPENQ96T58 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC14.68□□□□□ -0.06
SPENQ96T58 RHOQP1-201ENST00000555758 579 ntBASIC14.68□□□□□ -0.06
SPENQ96T58 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SPENQ96T58 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPENQ96T58 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPENQ96T58 AC018892.3-201ENST00000623986 2499 ntBASIC14.68□□□□□ -0.06
SPENQ96T58 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.68□□□□□ -0.06
SPENQ96T58 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SPENQ96T58 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPENQ96T58 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SPENQ96T58 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.68□□□□□ -0.06
SPENQ96T58 RNA5SP410-201ENST00000516285 106 ntBASIC14.68□□□□□ -0.06
SPENQ96T58 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPENQ96T58 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.68□□□□□ -0.06
SPENQ96T58 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
SPENQ96T58 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.68□□□□□ -0.06
SPENQ96T58 TMEM261P1-201ENST00000604899 340 ntBASIC14.68□□□□□ -0.06
SPENQ96T58 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.68□□□□□ -0.06
SPENQ96T58 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SPENQ96T58 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.67□□□□□ -0.06
SPENQ96T58 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.67□□□□□ -0.06
SPENQ96T58 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPENQ96T58 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SPENQ96T58 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
SPENQ96T58 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SPENQ96T58 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPENQ96T58 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SPENQ96T58 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.67□□□□□ -0.06
SPENQ96T58 AC108725.1-201ENST00000495472 409 ntBASIC14.67□□□□□ -0.06
SPENQ96T58 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.67□□□□□ -0.06
SPENQ96T58 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.67□□□□□ -0.06
SPENQ96T58 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPENQ96T58 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.67□□□□□ -0.06
SPENQ96T58 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.67□□□□□ -0.06
SPENQ96T58 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SPENQ96T58 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.67□□□□□ -0.06
SPENQ96T58 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SPENQ96T58 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPENQ96T58 SPDYE17-201ENST00000412399 783 ntBASIC14.67□□□□□ -0.06
SPENQ96T58 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.67□□□□□ -0.06
SPENQ96T58 AP001350.2-201ENST00000625104 1094 ntBASIC14.67□□□□□ -0.06
SPENQ96T58 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPENQ96T58 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPENQ96T58 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPENQ96T58 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPENQ96T58 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPENQ96T58 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPENQ96T58 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.67□□□□□ -0.06
SPENQ96T58 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPENQ96T58 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPENQ96T58 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPENQ96T58 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.67□□□□□ -0.06
SPENQ96T58 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SPENQ96T58 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPENQ96T58 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPENQ96T58 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.67□□□□□ -0.06
SPENQ96T58 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SPENQ96T58 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.67□□□□□ -0.06
SPENQ96T58 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SPENQ96T58 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPENQ96T58 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SPENQ96T58 AL138688.1-201ENST00000624851 1594 ntBASIC14.66□□□□□ -0.06
SPENQ96T58 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SPENQ96T58 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.66□□□□□ -0.06
SPENQ96T58 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SPENQ96T58 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.66□□□□□ -0.06
SPENQ96T58 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.66□□□□□ -0.06
SPENQ96T58 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SPENQ96T58 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.66□□□□□ -0.06
SPENQ96T58 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.66□□□□□ -0.06
SPENQ96T58 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.66□□□□□ -0.06
SPENQ96T58 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
SPENQ96T58 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPENQ96T58 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPENQ96T58 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.66□□□□□ -0.06
SPENQ96T58 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPENQ96T58 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SPENQ96T58 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.66□□□□□ -0.06
SPENQ96T58 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPENQ96T58 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SPENQ96T58 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPENQ96T58 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPENQ96T58 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPENQ96T58 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
SPENQ96T58 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SPENQ96T58 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.66□□□□□ -0.06
SPENQ96T58 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.66□□□□□ -0.06
SPENQ96T58 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SPENQ96T58 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.66□□□□□ -0.06
SPENQ96T58 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.66□□□□□ -0.06
SPENQ96T58 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms