Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 PCDHB17P-201ENST00000539533 2393 ntBASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 AC098859.1-201ENST00000502915 1238 ntBASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 AC084346.2-201ENST00000607097 949 ntBASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 CETN4P-206ENST00000642099 2168 ntBASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 AC006277.1-201ENST00000624348 1610 ntBASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 NME2P1-201ENST00000426182 414 ntBASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.73■□□□□ 0.59
SYNGAP1Q96PV0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 AL359881.2-201ENST00000602973 570 ntBASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 RN7SL828P-201ENST00000607615 303 ntBASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 AL844908.2-201ENST00000609461 460 ntBASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.72■□□□□ 0.59
SYNGAP1Q96PV0 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms