Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.46□□□□□ -0.41
LINC00477Q96M19 AC008608.2-201ENST00000606089 416 ntBASIC12.46□□□□□ -0.41
LINC00477Q96M19 AL732292.2-201ENST00000609649 430 ntBASIC12.46□□□□□ -0.41
LINC00477Q96M19 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
LINC00477Q96M19 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
LINC00477Q96M19 AL596087.1-201ENST00000400979 1969 ntBASIC12.46□□□□□ -0.41
LINC00477Q96M19 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC12.46□□□□□ -0.41
LINC00477Q96M19 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00477Q96M19 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC12.46□□□□□ -0.41
LINC00477Q96M19 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00477Q96M19 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.46□□□□□ -0.42
LINC00477Q96M19 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC12.46□□□□□ -0.42
LINC00477Q96M19 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00477Q96M19 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00477Q96M19 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00477Q96M19 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC12.46□□□□□ -0.42
LINC00477Q96M19 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00477Q96M19 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00477Q96M19 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00477Q96M19 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
LINC00477Q96M19 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
LINC00477Q96M19 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00477Q96M19 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.46□□□□□ -0.42
LINC00477Q96M19 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC12.46□□□□□ -0.42
LINC00477Q96M19 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
LINC00477Q96M19 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
LINC00477Q96M19 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00477Q96M19 LTF-203ENST00000426532 2494 ntTSL 2 BASIC12.46□□□□□ -0.42
LINC00477Q96M19 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00477Q96M19 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00477Q96M19 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00477Q96M19 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
LINC00477Q96M19 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00477Q96M19 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC12.46□□□□□ -0.42
LINC00477Q96M19 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00477Q96M19 LINC02199-201ENST00000506655 2702 ntBASIC12.46□□□□□ -0.42
LINC00477Q96M19 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00477Q96M19 AL031731.1-201ENST00000642131 2094 ntBASIC12.46□□□□□ -0.42
LINC00477Q96M19 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC12.45□□□□□ -0.42
LINC00477Q96M19 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC00477Q96M19 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC00477Q96M19 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
LINC00477Q96M19 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC00477Q96M19 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 AC129492.6-201ENST00000611383 1305 ntBASIC12.45□□□□□ -0.42
LINC00477Q96M19 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC00477Q96M19 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
LINC00477Q96M19 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC00477Q96M19 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
LINC00477Q96M19 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.45□□□□□ -0.42
LINC00477Q96M19 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
LINC00477Q96M19 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC12.45□□□□□ -0.42
LINC00477Q96M19 FGFR3P6-201ENST00000457012 610 ntBASIC12.45□□□□□ -0.42
LINC00477Q96M19 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC12.45□□□□□ -0.42
LINC00477Q96M19 KRT18P31-201ENST00000506277 1292 ntBASIC12.45□□□□□ -0.42
LINC00477Q96M19 AC087641.1-201ENST00000557561 1021 ntBASIC12.45□□□□□ -0.42
LINC00477Q96M19 AC091304.2-201ENST00000564639 760 ntBASIC12.45□□□□□ -0.42
LINC00477Q96M19 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.45□□□□□ -0.42
LINC00477Q96M19 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC12.45□□□□□ -0.42
LINC00477Q96M19 BSG-214ENST00000614867 960 ntTSL 3 BASIC12.45□□□□□ -0.42
LINC00477Q96M19 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC12.45□□□□□ -0.42
LINC00477Q96M19 AL805961.1-202ENST00000641562 540 ntBASIC12.45□□□□□ -0.42
LINC00477Q96M19 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC00477Q96M19 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
LINC00477Q96M19 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC00477Q96M19 GGT4P-201ENST00000623672 1708 ntBASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms