Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 AC133539.2-201ENST00000604757 467 ntBASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 LINC02012-201ENST00000608206 1725 ntBASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 AC092053.1-201ENST00000605787 1936 ntBASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 AL354751.1-201ENST00000412768 1863 ntBASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 AC092506.1-202ENST00000401022 528 ntBASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 MIR1247-201ENST00000408206 136 ntBASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 GPAA1P2-201ENST00000417923 928 ntBASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM43Q96BQ3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 ELK2AP-201ENST00000392510 1007 ntBASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 FO393414.2-201ENST00000405153 598 ntBASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 AL442647.2-201ENST00000429864 857 ntBASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 PFN1P12-201ENST00000455938 534 ntBASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 AC243960.2-201ENST00000600996 747 ntBASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 AC020765.3-201ENST00000613051 740 ntBASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
TRIM43Q96BQ3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM43Q96BQ3 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms