Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ATP2A3Q93084 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A3Q93084 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
ATP2A3Q93084 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.47■□□□□ 0.39
ATP2A3Q93084 AC008894.3-201ENST00000624324 3103 ntBASIC17.47■□□□□ 0.39
ATP2A3Q93084 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A3Q93084 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A3Q93084 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A3Q93084 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A3Q93084 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A3Q93084 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A3Q93084 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.47■□□□□ 0.39
ATP2A3Q93084 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
ATP2A3Q93084 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A3Q93084 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ATP2A3Q93084 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A3Q93084 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A3Q93084 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A3Q93084 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A3Q93084 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A3Q93084 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ATP2A3Q93084 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A3Q93084 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP2A3Q93084 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP2A3Q93084 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A3Q93084 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ATP2A3Q93084 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP2A3Q93084 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A3Q93084 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A3Q93084 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
ATP2A3Q93084 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.46■□□□□ 0.39
ATP2A3Q93084 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A3Q93084 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP2A3Q93084 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ATP2A3Q93084 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ATP2A3Q93084 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A3Q93084 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A3Q93084 AC005237.2-201ENST00000434368 219 ntBASIC17.46■□□□□ 0.39
ATP2A3Q93084 KRT8P48-201ENST00000515599 1220 ntBASIC17.46■□□□□ 0.39
ATP2A3Q93084 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.46■□□□□ 0.39
ATP2A3Q93084 RARRES2P8-201ENST00000566335 367 ntBASIC17.46■□□□□ 0.39
ATP2A3Q93084 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.46■□□□□ 0.39
ATP2A3Q93084 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.46■□□□□ 0.39
ATP2A3Q93084 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.46■□□□□ 0.39
ATP2A3Q93084 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A3Q93084 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.46■□□□□ 0.39
ATP2A3Q93084 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A3Q93084 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.46■□□□□ 0.39
ATP2A3Q93084 AC012569.1-201ENST00000591191 1524 ntBASIC17.46■□□□□ 0.39
ATP2A3Q93084 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP2A3Q93084 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ATP2A3Q93084 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
ATP2A3Q93084 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.46■□□□□ 0.38
ATP2A3Q93084 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ATP2A3Q93084 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
ATP2A3Q93084 AKAP8P1-201ENST00000434743 1349 ntBASIC17.46■□□□□ 0.38
ATP2A3Q93084 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ATP2A3Q93084 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
ATP2A3Q93084 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A3Q93084 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
ATP2A3Q93084 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A3Q93084 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A3Q93084 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ATP2A3Q93084 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A3Q93084 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ATP2A3Q93084 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
ATP2A3Q93084 TFAMP1-201ENST00000412727 736 ntBASIC17.45■□□□□ 0.38
ATP2A3Q93084 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.45■□□□□ 0.38
ATP2A3Q93084 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A3Q93084 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.45■□□□□ 0.38
ATP2A3Q93084 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.45■□□□□ 0.38
ATP2A3Q93084 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.45■□□□□ 0.38
ATP2A3Q93084 AC109322.1-201ENST00000524499 1264 ntBASIC17.45■□□□□ 0.38
ATP2A3Q93084 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.45■□□□□ 0.38
ATP2A3Q93084 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.45■□□□□ 0.38
ATP2A3Q93084 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.45■□□□□ 0.38
ATP2A3Q93084 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.45■□□□□ 0.38
ATP2A3Q93084 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.45■□□□□ 0.38
ATP2A3Q93084 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A3Q93084 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP2A3Q93084 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
ATP2A3Q93084 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
ATP2A3Q93084 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A3Q93084 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A3Q93084 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A3Q93084 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP2A3Q93084 AGGF1P2-201ENST00000426656 2106 ntBASIC17.45■□□□□ 0.38
ATP2A3Q93084 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A3Q93084 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP2A3Q93084 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A3Q93084 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
ATP2A3Q93084 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A3Q93084 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A3Q93084 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP2A3Q93084 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A3Q93084 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.45■□□□□ 0.38
ATP2A3Q93084 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A3Q93084 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A3Q93084 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.44■□□□□ 0.38
ATP2A3Q93084 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms