Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF4Q92544 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
TM9SF4Q92544 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF4Q92544 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF4Q92544 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF4Q92544 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.67■□□□□ 0.1
TM9SF4Q92544 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.67■□□□□ 0.1
TM9SF4Q92544 AC092171.3-201ENST00000610122 2651 ntBASIC15.67■□□□□ 0.1
TM9SF4Q92544 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TM9SF4Q92544 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.67■□□□□ 0.1
TM9SF4Q92544 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF4Q92544 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF4Q92544 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF4Q92544 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF4Q92544 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.67■□□□□ 0.1
TM9SF4Q92544 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.67■□□□□ 0.1
TM9SF4Q92544 AL355306.1-201ENST00000415580 579 ntBASIC15.67■□□□□ 0.1
TM9SF4Q92544 AL671277.1-201ENST00000429656 993 ntBASIC15.67■□□□□ 0.1
TM9SF4Q92544 AC140658.5-201ENST00000438532 169 ntBASIC15.67■□□□□ 0.1
TM9SF4Q92544 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF4Q92544 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.67■□□□□ 0.1
TM9SF4Q92544 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.67■□□□□ 0.1
TM9SF4Q92544 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.67■□□□□ 0.1
TM9SF4Q92544 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.67■□□□□ 0.1
TM9SF4Q92544 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.67■□□□□ 0.1
TM9SF4Q92544 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.67■□□□□ 0.1
TM9SF4Q92544 PCDHA1-201ENST00000378133 2726 ntBASIC15.67■□□□□ 0.1
TM9SF4Q92544 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF4Q92544 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.67■□□□□ 0.1
TM9SF4Q92544 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.67■□□□□ 0.1
TM9SF4Q92544 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF4Q92544 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TM9SF4Q92544 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF4Q92544 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF4Q92544 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF4Q92544 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF4Q92544 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF4Q92544 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF4Q92544 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.66■□□□□ 0.1
TM9SF4Q92544 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF4Q92544 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.66■□□□□ 0.1
TM9SF4Q92544 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF4Q92544 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF4Q92544 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF4Q92544 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TM9SF4Q92544 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.66■□□□□ 0.1
TM9SF4Q92544 AC092919.2-201ENST00000623631 1645 ntBASIC15.66■□□□□ 0.1
TM9SF4Q92544 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF4Q92544 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
TM9SF4Q92544 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF4Q92544 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TM9SF4Q92544 AL139400.1-201ENST00000366220 510 ntBASIC15.66■□□□□ 0.1
TM9SF4Q92544 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
TM9SF4Q92544 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF4Q92544 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TM9SF4Q92544 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.66■□□□□ 0.1
TM9SF4Q92544 AC005237.2-201ENST00000434368 219 ntBASIC15.66■□□□□ 0.1
TM9SF4Q92544 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.66■□□□□ 0.1
TM9SF4Q92544 SLC25A6P2-201ENST00000497974 877 ntBASIC15.66■□□□□ 0.1
TM9SF4Q92544 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.66■□□□□ 0.1
TM9SF4Q92544 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.66■□□□□ 0.1
TM9SF4Q92544 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF4Q92544 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF4Q92544 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.66■□□□□ 0.1
TM9SF4Q92544 SPCS2P1-201ENST00000561636 679 ntBASIC15.66■□□□□ 0.1
TM9SF4Q92544 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TM9SF4Q92544 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.66■□□□□ 0.1
TM9SF4Q92544 AC093512.1-201ENST00000617969 520 ntBASIC15.66■□□□□ 0.1
TM9SF4Q92544 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.66■□□□□ 0.1
TM9SF4Q92544 AL161645.1-201ENST00000622716 1255 ntBASIC15.66■□□□□ 0.1
TM9SF4Q92544 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.66■□□□□ 0.1
TM9SF4Q92544 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF4Q92544 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
TM9SF4Q92544 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF4Q92544 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.66■□□□□ 0.1
TM9SF4Q92544 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF4Q92544 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF4Q92544 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
TM9SF4Q92544 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.66■□□□□ 0.1
TM9SF4Q92544 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF4Q92544 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF4Q92544 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.66■□□□□ 0.1
TM9SF4Q92544 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.66■□□□□ 0.1
TM9SF4Q92544 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
TM9SF4Q92544 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF4Q92544 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF4Q92544 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.65■□□□□ 0.1
TM9SF4Q92544 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
TM9SF4Q92544 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF4Q92544 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TM9SF4Q92544 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.65■□□□□ 0.1
TM9SF4Q92544 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF4Q92544 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TM9SF4Q92544 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF4Q92544 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.65■□□□□ 0.1
TM9SF4Q92544 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF4Q92544 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TM9SF4Q92544 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF4Q92544 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF4Q92544 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms