Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 TIMM8BP1-201ENST00000452384 211 ntBASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 PRYP6-201ENST00000514804 343 ntBASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 AC027307.2-201ENST00000591252 911 ntBASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 AC073389.1-201ENST00000595595 795 ntBASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 AC022145.2-201ENST00000598203 171 ntBASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 AC008267.7-201ENST00000624570 1194 ntBASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 AL513210.1-201ENST00000629608 234 ntBASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 AC006449.5-201ENST00000610658 2098 ntBASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZIC4Q8N9L1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 MIR346-201ENST00000362234 95 ntBASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 AC211486.1-202ENST00000416371 468 ntBASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 AC211476.1-201ENST00000503899 468 ntBASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms