Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDZRN4Q6ZMN7 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 AC022532.1-201ENST00000624563 1728 ntBASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 AF186996.4-201ENST00000467186 377 ntBASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 RNA5SP419-201ENST00000515908 135 ntBASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 CICP13-201ENST00000422015 2789 ntBASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDZRN4Q6ZMN7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.14■□□□□ 0.66
PDZRN4Q6ZMN7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PDZRN4Q6ZMN7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
PDZRN4Q6ZMN7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.14■□□□□ 0.66
PDZRN4Q6ZMN7 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
PDZRN4Q6ZMN7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PDZRN4Q6ZMN7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.66
PDZRN4Q6ZMN7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.14■□□□□ 0.66
PDZRN4Q6ZMN7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.14■□□□□ 0.65
PDZRN4Q6ZMN7 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PDZRN4Q6ZMN7 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDZRN4Q6ZMN7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDZRN4Q6ZMN7 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDZRN4Q6ZMN7 FGFR3P6-201ENST00000457012 610 ntBASIC19.14■□□□□ 0.65
PDZRN4Q6ZMN7 AP001269.4-201ENST00000609611 512 ntBASIC19.14■□□□□ 0.65
PDZRN4Q6ZMN7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDZRN4Q6ZMN7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDZRN4Q6ZMN7 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PDZRN4Q6ZMN7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PDZRN4Q6ZMN7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDZRN4Q6ZMN7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.14■□□□□ 0.65
PDZRN4Q6ZMN7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.14■□□□□ 0.65
PDZRN4Q6ZMN7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDZRN4Q6ZMN7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.14■□□□□ 0.65
PDZRN4Q6ZMN7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.14■□□□□ 0.65
PDZRN4Q6ZMN7 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDZRN4Q6ZMN7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC19.14■□□□□ 0.65
PDZRN4Q6ZMN7 AC132938.6-201ENST00000623828 1655 ntBASIC19.14■□□□□ 0.65
PDZRN4Q6ZMN7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDZRN4Q6ZMN7 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDZRN4Q6ZMN7 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDZRN4Q6ZMN7 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 MTDHP3-201ENST00000594186 672 ntBASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 BX640515.1-201ENST00000617215 977 ntBASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 MTHFR-217ENST00000641820 1569 ntBASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms