Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 AC092910.1-201ENST00000482027 1129 ntBASIC16.34■□□□□ 0.21
CDKL1Q00532 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.34■□□□□ 0.21
CDKL1Q00532 AC093909.1-201ENST00000504731 1122 ntBASIC16.34■□□□□ 0.21
CDKL1Q00532 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDKL1Q00532 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
CDKL1Q00532 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.34■□□□□ 0.21
CDKL1Q00532 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.34■□□□□ 0.21
CDKL1Q00532 AC004790.2-201ENST00000623588 572 ntBASIC16.34■□□□□ 0.21
CDKL1Q00532 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CDKL1Q00532 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDKL1Q00532 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDKL1Q00532 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDKL1Q00532 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CDKL1Q00532 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CDKL1Q00532 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CDKL1Q00532 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.34■□□□□ 0.21
CDKL1Q00532 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDKL1Q00532 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.34■□□□□ 0.21
CDKL1Q00532 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.34■□□□□ 0.21
CDKL1Q00532 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDKL1Q00532 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CDKL1Q00532 DBET-201ENST00000630918 3363 ntBASIC16.34■□□□□ 0.21
CDKL1Q00532 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CDKL1Q00532 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CDKL1Q00532 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CDKL1Q00532 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDKL1Q00532 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDKL1Q00532 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDKL1Q00532 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDKL1Q00532 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDKL1Q00532 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.33■□□□□ 0.2
CDKL1Q00532 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CDKL1Q00532 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDKL1Q00532 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CDKL1Q00532 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDKL1Q00532 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.33■□□□□ 0.2
CDKL1Q00532 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.33■□□□□ 0.2
CDKL1Q00532 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDKL1Q00532 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.33■□□□□ 0.2
CDKL1Q00532 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
CDKL1Q00532 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.33■□□□□ 0.2
CDKL1Q00532 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.33■□□□□ 0.2
CDKL1Q00532 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CDKL1Q00532 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDKL1Q00532 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
CDKL1Q00532 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDKL1Q00532 GGT3P-204ENST00000453783 1664 ntBASIC16.33■□□□□ 0.2
CDKL1Q00532 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.33■□□□□ 0.2
CDKL1Q00532 AL512652.2-201ENST00000625156 1716 ntBASIC16.33■□□□□ 0.2
CDKL1Q00532 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDKL1Q00532 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDKL1Q00532 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDKL1Q00532 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDKL1Q00532 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDKL1Q00532 AL365203.3-201ENST00000609742 2057 ntBASIC16.33■□□□□ 0.2
CDKL1Q00532 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDKL1Q00532 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDKL1Q00532 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CDKL1Q00532 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDKL1Q00532 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.33■□□□□ 0.2
CDKL1Q00532 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDKL1Q00532 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CDKL1Q00532 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL1Q00532 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL1Q00532 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL1Q00532 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL1Q00532 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL1Q00532 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL1Q00532 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL1Q00532 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL1Q00532 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL1Q00532 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.32■□□□□ 0.2
CDKL1Q00532 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKL1Q00532 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL1Q00532 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKL1Q00532 MRPL3P1-201ENST00000400109 1033 ntBASIC16.32■□□□□ 0.2
CDKL1Q00532 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.32■□□□□ 0.2
CDKL1Q00532 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL1Q00532 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL1Q00532 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.32■□□□□ 0.2
CDKL1Q00532 AC098831.1-202ENST00000438821 336 ntBASIC16.32■□□□□ 0.2
CDKL1Q00532 FAM185BP-201ENST00000443595 716 ntBASIC16.32■□□□□ 0.2
CDKL1Q00532 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKL1Q00532 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL1Q00532 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKL1Q00532 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL1Q00532 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.32■□□□□ 0.2
CDKL1Q00532 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKL1Q00532 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKL1Q00532 AP001005.1-201ENST00000571755 1248 ntBASIC16.32■□□□□ 0.2
CDKL1Q00532 SLC25A6P4-201ENST00000586535 553 ntBASIC16.32■□□□□ 0.2
CDKL1Q00532 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CDKL1Q00532 AL049840.3-201ENST00000602669 611 ntBASIC16.32■□□□□ 0.2
CDKL1Q00532 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.32■□□□□ 0.2
CDKL1Q00532 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.32■□□□□ 0.2
CDKL1Q00532 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
CDKL1Q00532 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CDKL1Q00532 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKL1Q00532 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.32■□□□□ 0.2
CDKL1Q00532 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms