Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX6-1P78426 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX6-1P78426 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.65□□□□□ -0.06
NKX6-1P78426 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.65□□□□□ -0.06
NKX6-1P78426 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.65□□□□□ -0.06
NKX6-1P78426 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
NKX6-1P78426 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.65□□□□□ -0.06
NKX6-1P78426 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.65□□□□□ -0.06
NKX6-1P78426 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.65□□□□□ -0.06
NKX6-1P78426 AC107918.2-201ENST00000530817 355 ntBASIC14.65□□□□□ -0.06
NKX6-1P78426 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
NKX6-1P78426 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
NKX6-1P78426 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
NKX6-1P78426 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.65□□□□□ -0.06
NKX6-1P78426 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.65□□□□□ -0.06
NKX6-1P78426 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.65□□□□□ -0.06
NKX6-1P78426 ACTL9-202ENST00000612068 1252 ntBASIC14.65□□□□□ -0.06
NKX6-1P78426 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.65□□□□□ -0.06
NKX6-1P78426 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.65□□□□□ -0.06
NKX6-1P78426 LINC02012-201ENST00000608206 1725 ntBASIC14.65□□□□□ -0.06
NKX6-1P78426 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX6-1P78426 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX6-1P78426 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
NKX6-1P78426 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX6-1P78426 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.65□□□□□ -0.06
NKX6-1P78426 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NKX6-1P78426 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NKX6-1P78426 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.65□□□□□ -0.06
NKX6-1P78426 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NKX6-1P78426 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.65□□□□□ -0.06
NKX6-1P78426 FRMD8P1-201ENST00000440433 1524 ntBASIC14.65□□□□□ -0.06
NKX6-1P78426 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.65□□□□□ -0.06
NKX6-1P78426 AC011676.5-201ENST00000624864 2660 ntBASIC14.65□□□□□ -0.06
NKX6-1P78426 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NKX6-1P78426 AL365209.1-201ENST00000624418 6473 ntBASIC14.65□□□□□ -0.06
NKX6-1P78426 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NKX6-1P78426 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NKX6-1P78426 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NKX6-1P78426 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.64□□□□□ -0.07
NKX6-1P78426 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NKX6-1P78426 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.64□□□□□ -0.07
NKX6-1P78426 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NKX6-1P78426 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NKX6-1P78426 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NKX6-1P78426 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NKX6-1P78426 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.64□□□□□ -0.07
NKX6-1P78426 AL645608.8-201ENST00000606034 2086 ntBASIC14.64□□□□□ -0.07
NKX6-1P78426 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NKX6-1P78426 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NKX6-1P78426 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NKX6-1P78426 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
NKX6-1P78426 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NKX6-1P78426 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NKX6-1P78426 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.64□□□□□ -0.07
NKX6-1P78426 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.64□□□□□ -0.07
NKX6-1P78426 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.64□□□□□ -0.07
NKX6-1P78426 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NKX6-1P78426 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.64□□□□□ -0.07
NKX6-1P78426 AC022145.2-201ENST00000598203 171 ntBASIC14.64□□□□□ -0.07
NKX6-1P78426 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.64□□□□□ -0.07
NKX6-1P78426 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NKX6-1P78426 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NKX6-1P78426 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NKX6-1P78426 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
NKX6-1P78426 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.64□□□□□ -0.07
NKX6-1P78426 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
NKX6-1P78426 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.64□□□□□ -0.07
NKX6-1P78426 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NKX6-1P78426 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NKX6-1P78426 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NKX6-1P78426 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NKX6-1P78426 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
NKX6-1P78426 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NKX6-1P78426 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
NKX6-1P78426 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
NKX6-1P78426 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NKX6-1P78426 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NKX6-1P78426 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NKX6-1P78426 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
NKX6-1P78426 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NKX6-1P78426 TSPY26P-202ENST00000565928 3884 ntBASIC14.64□□□□□ -0.07
NKX6-1P78426 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
NKX6-1P78426 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.63□□□□□ -0.07
NKX6-1P78426 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
NKX6-1P78426 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.63□□□□□ -0.07
NKX6-1P78426 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-1P78426 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-1P78426 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-1P78426 AL121761.2-201ENST00000598007 1648 ntBASIC14.63□□□□□ -0.07
NKX6-1P78426 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NKX6-1P78426 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-1P78426 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-1P78426 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
NKX6-1P78426 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-1P78426 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
NKX6-1P78426 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-1P78426 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.63□□□□□ -0.07
NKX6-1P78426 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.63□□□□□ -0.07
NKX6-1P78426 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-1P78426 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms