Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
IRX4P78413 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IRX4P78413 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
IRX4P78413 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IRX4P78413 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IRX4P78413 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
IRX4P78413 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IRX4P78413 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
IRX4P78413 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.3■□□□□ 0.36
IRX4P78413 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IRX4P78413 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IRX4P78413 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.3■□□□□ 0.36
IRX4P78413 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IRX4P78413 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IRX4P78413 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IRX4P78413 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.3■□□□□ 0.36
IRX4P78413 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IRX4P78413 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.3■□□□□ 0.36
IRX4P78413 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IRX4P78413 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.3■□□□□ 0.36
IRX4P78413 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
IRX4P78413 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IRX4P78413 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IRX4P78413 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IRX4P78413 SLC25A1P3-201ENST00000395415 828 ntBASIC17.3■□□□□ 0.36
IRX4P78413 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.3■□□□□ 0.36
IRX4P78413 FAM58CP-201ENST00000435741 640 ntBASIC17.3■□□□□ 0.36
IRX4P78413 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.3■□□□□ 0.36
IRX4P78413 BCRP1-201ENST00000444246 691 ntBASIC17.3■□□□□ 0.36
IRX4P78413 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.3■□□□□ 0.36
IRX4P78413 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.3■□□□□ 0.36
IRX4P78413 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IRX4P78413 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IRX4P78413 AP000344.2-201ENST00000512987 629 ntBASIC17.3■□□□□ 0.36
IRX4P78413 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.3■□□□□ 0.36
IRX4P78413 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.3■□□□□ 0.36
IRX4P78413 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.3■□□□□ 0.36
IRX4P78413 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
IRX4P78413 AC093512.1-201ENST00000617969 520 ntBASIC17.3■□□□□ 0.36
IRX4P78413 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.3■□□□□ 0.36
IRX4P78413 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IRX4P78413 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.3■□□□□ 0.36
IRX4P78413 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IRX4P78413 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
IRX4P78413 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
IRX4P78413 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
IRX4P78413 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IRX4P78413 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IRX4P78413 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
IRX4P78413 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IRX4P78413 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
IRX4P78413 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IRX4P78413 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.3■□□□□ 0.36
IRX4P78413 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IRX4P78413 AC092068.3-201ENST00000587894 2016 ntBASIC17.3■□□□□ 0.36
IRX4P78413 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IRX4P78413 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
IRX4P78413 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.3■□□□□ 0.36
IRX4P78413 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IRX4P78413 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
IRX4P78413 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
IRX4P78413 LINC02199-201ENST00000506655 2702 ntBASIC17.29■□□□□ 0.36
IRX4P78413 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IRX4P78413 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
IRX4P78413 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IRX4P78413 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IRX4P78413 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
IRX4P78413 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IRX4P78413 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IRX4P78413 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
IRX4P78413 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IRX4P78413 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.29■□□□□ 0.36
IRX4P78413 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IRX4P78413 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
IRX4P78413 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
IRX4P78413 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.29■□□□□ 0.36
IRX4P78413 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.29■□□□□ 0.36
IRX4P78413 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.29■□□□□ 0.36
IRX4P78413 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
IRX4P78413 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
IRX4P78413 KRT19P2-202ENST00000557173 1012 ntBASIC17.29■□□□□ 0.36
IRX4P78413 AC096734.2-201ENST00000562054 433 ntBASIC17.29■□□□□ 0.36
IRX4P78413 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.29■□□□□ 0.36
IRX4P78413 AC010654.1-201ENST00000615722 808 ntBASIC17.29■□□□□ 0.36
IRX4P78413 AC010507.1-201ENST00000633895 436 ntBASIC17.29■□□□□ 0.36
IRX4P78413 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
IRX4P78413 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.29■□□□□ 0.36
IRX4P78413 DOC2GP-204ENST00000639052 2548 ntBASIC17.29■□□□□ 0.36
IRX4P78413 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.29■□□□□ 0.36
IRX4P78413 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IRX4P78413 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.29■□□□□ 0.36
IRX4P78413 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
IRX4P78413 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
IRX4P78413 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.29■□□□□ 0.36
IRX4P78413 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IRX4P78413 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IRX4P78413 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IRX4P78413 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.28■□□□□ 0.36
IRX4P78413 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IRX4P78413 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms