Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAE1P78406 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAE1P78406 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAE1P78406 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAE1P78406 AC046158.3-201ENST00000624947 2558 ntBASIC15.7■□□□□ 0.1
RAE1P78406 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAE1P78406 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAE1P78406 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.7■□□□□ 0.1
RAE1P78406 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAE1P78406 IL9RP2-201ENST00000423948 1312 ntBASIC15.69■□□□□ 0.1
RAE1P78406 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAE1P78406 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAE1P78406 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.69■□□□□ 0.1
RAE1P78406 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
RAE1P78406 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RAE1P78406 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAE1P78406 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.69■□□□□ 0.1
RAE1P78406 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.69■□□□□ 0.1
RAE1P78406 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAE1P78406 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAE1P78406 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.69■□□□□ 0.1
RAE1P78406 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAE1P78406 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RAE1P78406 AC010491.1-201ENST00000563101 2797 ntBASIC15.69■□□□□ 0.1
RAE1P78406 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAE1P78406 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
RAE1P78406 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAE1P78406 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAE1P78406 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.69■□□□□ 0.1
RAE1P78406 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.69■□□□□ 0.1
RAE1P78406 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.69■□□□□ 0.1
RAE1P78406 RPL13AP23-201ENST00000480739 586 ntBASIC15.69■□□□□ 0.1
RAE1P78406 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
RAE1P78406 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.69■□□□□ 0.1
RAE1P78406 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAE1P78406 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.69■□□□□ 0.1
RAE1P78406 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.69■□□□□ 0.1
RAE1P78406 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RAE1P78406 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAE1P78406 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAE1P78406 AC023141.13-201ENST00000604991 943 ntBASIC15.69■□□□□ 0.1
RAE1P78406 AC064836.3-201ENST00000607928 673 ntBASIC15.69■□□□□ 0.1
RAE1P78406 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.69■□□□□ 0.1
RAE1P78406 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAE1P78406 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RAE1P78406 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RAE1P78406 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAE1P78406 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
RAE1P78406 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.69■□□□□ 0.1
RAE1P78406 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAE1P78406 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.69■□□□□ 0.1
RAE1P78406 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAE1P78406 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.69■□□□□ 0.1
RAE1P78406 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.69■□□□□ 0.1
RAE1P78406 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
RAE1P78406 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.69■□□□□ 0.1
RAE1P78406 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAE1P78406 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAE1P78406 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RAE1P78406 AC025580.3-201ENST00000617932 1424 ntBASIC15.68■□□□□ 0.1
RAE1P78406 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RAE1P78406 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAE1P78406 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAE1P78406 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.68■□□□□ 0.1
RAE1P78406 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RAE1P78406 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAE1P78406 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAE1P78406 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.68■□□□□ 0.1
RAE1P78406 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAE1P78406 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
RAE1P78406 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RAE1P78406 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAE1P78406 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAE1P78406 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAE1P78406 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAE1P78406 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RAE1P78406 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.68■□□□□ 0.1
RAE1P78406 AC092474.2-201ENST00000424288 719 ntBASIC15.68■□□□□ 0.1
RAE1P78406 AC007967.2-201ENST00000432613 625 ntBASIC15.68■□□□□ 0.1
RAE1P78406 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
RAE1P78406 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.68■□□□□ 0.1
RAE1P78406 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAE1P78406 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RAE1P78406 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAE1P78406 AC109635.5-201ENST00000533593 962 ntBASIC15.68■□□□□ 0.1
RAE1P78406 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.68■□□□□ 0.1
RAE1P78406 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.68■□□□□ 0.1
RAE1P78406 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.68■□□□□ 0.1
RAE1P78406 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.68■□□□□ 0.1
RAE1P78406 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.68■□□□□ 0.1
RAE1P78406 AC004877.2-201ENST00000623941 599 ntBASIC15.68■□□□□ 0.1
RAE1P78406 AC007064.4-201ENST00000637740 555 ntBASIC15.68■□□□□ 0.1
RAE1P78406 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAE1P78406 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAE1P78406 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAE1P78406 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAE1P78406 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RAE1P78406 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.68■□□□□ 0.1
RAE1P78406 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAE1P78406 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms