Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCS2P54868 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCS2P54868 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
HMGCS2P54868 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCS2P54868 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCS2P54868 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCS2P54868 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCS2P54868 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCS2P54868 AL023806.1-201ENST00000603994 1649 ntBASIC18.96■□□□□ 0.63
HMGCS2P54868 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
HMGCS2P54868 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
HMGCS2P54868 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCS2P54868 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCS2P54868 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.96■□□□□ 0.63
HMGCS2P54868 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.96■□□□□ 0.63
HMGCS2P54868 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCS2P54868 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.96■□□□□ 0.63
HMGCS2P54868 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.96■□□□□ 0.63
HMGCS2P54868 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.96■□□□□ 0.63
HMGCS2P54868 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCS2P54868 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCS2P54868 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
HMGCS2P54868 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.96■□□□□ 0.63
HMGCS2P54868 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCS2P54868 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCS2P54868 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HMGCS2P54868 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.96■□□□□ 0.63
HMGCS2P54868 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.96■□□□□ 0.63
HMGCS2P54868 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.96■□□□□ 0.63
HMGCS2P54868 SRD5A3P1-201ENST00000603021 949 ntBASIC18.96■□□□□ 0.63
HMGCS2P54868 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
HMGCS2P54868 AC004461.2-201ENST00000629517 803 ntBASIC18.96■□□□□ 0.63
HMGCS2P54868 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.96■□□□□ 0.63
HMGCS2P54868 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCS2P54868 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.96■□□□□ 0.63
HMGCS2P54868 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.96■□□□□ 0.63
HMGCS2P54868 AC060834.1-201ENST00000443027 2032 ntBASIC18.96■□□□□ 0.63
HMGCS2P54868 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.96■□□□□ 0.63
HMGCS2P54868 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.96■□□□□ 0.63
HMGCS2P54868 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
HMGCS2P54868 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
HMGCS2P54868 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
HMGCS2P54868 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCS2P54868 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.95■□□□□ 0.62
HMGCS2P54868 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCS2P54868 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HMGCS2P54868 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGCS2P54868 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCS2P54868 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCS2P54868 GGT4P-201ENST00000623672 1708 ntBASIC18.95■□□□□ 0.62
HMGCS2P54868 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCS2P54868 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCS2P54868 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
HMGCS2P54868 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HMGCS2P54868 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCS2P54868 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCS2P54868 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCS2P54868 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.95■□□□□ 0.62
HMGCS2P54868 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.95■□□□□ 0.62
HMGCS2P54868 AL109936.8-201ENST00000641772 604 ntBASIC18.95■□□□□ 0.62
HMGCS2P54868 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HMGCS2P54868 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCS2P54868 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGCS2P54868 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCS2P54868 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.95■□□□□ 0.62
HMGCS2P54868 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGCS2P54868 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCS2P54868 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGCS2P54868 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
HMGCS2P54868 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCS2P54868 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCS2P54868 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCS2P54868 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
HMGCS2P54868 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.94■□□□□ 0.62
HMGCS2P54868 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCS2P54868 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.94■□□□□ 0.62
HMGCS2P54868 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCS2P54868 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.94■□□□□ 0.62
HMGCS2P54868 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
HMGCS2P54868 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCS2P54868 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
HMGCS2P54868 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.94■□□□□ 0.62
HMGCS2P54868 HLA-V-201ENST00000429037 534 ntBASIC18.94■□□□□ 0.62
HMGCS2P54868 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.94■□□□□ 0.62
HMGCS2P54868 AL589987.1-201ENST00000453380 819 ntBASIC18.94■□□□□ 0.62
HMGCS2P54868 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.94■□□□□ 0.62
HMGCS2P54868 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCS2P54868 SDHAP3-202ENST00000515467 728 ntBASIC18.94■□□□□ 0.62
HMGCS2P54868 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.94■□□□□ 0.62
HMGCS2P54868 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.94■□□□□ 0.62
HMGCS2P54868 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.94■□□□□ 0.62
HMGCS2P54868 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.94■□□□□ 0.62
HMGCS2P54868 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.94■□□□□ 0.62
HMGCS2P54868 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCS2P54868 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
HMGCS2P54868 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCS2P54868 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCS2P54868 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HMGCS2P54868 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCS2P54868 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms