Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CACNA2D1P54289 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CACNA2D1P54289 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CACNA2D1P54289 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CACNA2D1P54289 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CACNA2D1P54289 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CACNA2D1P54289 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CACNA2D1P54289 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CACNA2D1P54289 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CACNA2D1P54289 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.56■□□□□ 0.4
CACNA2D1P54289 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.56■□□□□ 0.4
CACNA2D1P54289 PMS2P2-201ENST00000425039 1128 ntBASIC17.56■□□□□ 0.4
CACNA2D1P54289 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.56■□□□□ 0.4
CACNA2D1P54289 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.56■□□□□ 0.4
CACNA2D1P54289 RN7SL589P-201ENST00000481268 310 ntBASIC17.56■□□□□ 0.4
CACNA2D1P54289 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.56■□□□□ 0.4
CACNA2D1P54289 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.56■□□□□ 0.4
CACNA2D1P54289 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.56■□□□□ 0.4
CACNA2D1P54289 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.56■□□□□ 0.4
CACNA2D1P54289 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CACNA2D1P54289 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.56■□□□□ 0.4
CACNA2D1P54289 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.56■□□□□ 0.4
CACNA2D1P54289 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CACNA2D1P54289 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CACNA2D1P54289 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CACNA2D1P54289 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CACNA2D1P54289 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CACNA2D1P54289 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CACNA2D1P54289 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.56■□□□□ 0.4
CACNA2D1P54289 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CACNA2D1P54289 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CACNA2D1P54289 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CACNA2D1P54289 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA2D1P54289 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA2D1P54289 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CACNA2D1P54289 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
CACNA2D1P54289 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA2D1P54289 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.55■□□□□ 0.4
CACNA2D1P54289 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA2D1P54289 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA2D1P54289 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.55■□□□□ 0.4
CACNA2D1P54289 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA2D1P54289 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA2D1P54289 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA2D1P54289 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.55■□□□□ 0.4
CACNA2D1P54289 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA2D1P54289 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.55■□□□□ 0.4
CACNA2D1P54289 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA2D1P54289 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA2D1P54289 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA2D1P54289 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA2D1P54289 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA2D1P54289 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA2D1P54289 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.55■□□□□ 0.4
CACNA2D1P54289 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA2D1P54289 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.55■□□□□ 0.4
CACNA2D1P54289 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA2D1P54289 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA2D1P54289 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.55■□□□□ 0.4
CACNA2D1P54289 AC109322.1-201ENST00000524499 1264 ntBASIC17.55■□□□□ 0.4
CACNA2D1P54289 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.55■□□□□ 0.4
CACNA2D1P54289 AC021097.1-201ENST00000607902 574 ntBASIC17.55■□□□□ 0.4
CACNA2D1P54289 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA2D1P54289 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.55■□□□□ 0.4
CACNA2D1P54289 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.55■□□□□ 0.4
CACNA2D1P54289 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA2D1P54289 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.55■□□□□ 0.4
CACNA2D1P54289 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA2D1P54289 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA2D1P54289 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CACNA2D1P54289 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CACNA2D1P54289 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CACNA2D1P54289 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA2D1P54289 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA2D1P54289 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CACNA2D1P54289 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.55■□□□□ 0.4
CACNA2D1P54289 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CACNA2D1P54289 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CACNA2D1P54289 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.54■□□□□ 0.4
CACNA2D1P54289 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CACNA2D1P54289 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CACNA2D1P54289 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
CACNA2D1P54289 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
CACNA2D1P54289 PCDHB19P-201ENST00000570871 2371 ntBASIC17.54■□□□□ 0.4
CACNA2D1P54289 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CACNA2D1P54289 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CACNA2D1P54289 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CACNA2D1P54289 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CACNA2D1P54289 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CACNA2D1P54289 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CACNA2D1P54289 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CACNA2D1P54289 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CACNA2D1P54289 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CACNA2D1P54289 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CACNA2D1P54289 TSEN15P1-201ENST00000423257 515 ntBASIC17.54■□□□□ 0.4
CACNA2D1P54289 AC023141.5-201ENST00000458585 616 ntBASIC17.54■□□□□ 0.4
CACNA2D1P54289 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.54■□□□□ 0.4
CACNA2D1P54289 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.54■□□□□ 0.4
CACNA2D1P54289 AC093028.1-201ENST00000622998 982 ntBASIC17.54■□□□□ 0.4
CACNA2D1P54289 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms