Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC1A6P48664 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC1A6P48664 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC1A6P48664 AL031133.1-201ENST00000406807 723 ntBASIC16.34■□□□□ 0.21
SLC1A6P48664 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
SLC1A6P48664 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC1A6P48664 AP002383.4-201ENST00000442518 975 ntBASIC16.34■□□□□ 0.21
SLC1A6P48664 LINC00265-3P-201ENST00000447588 903 ntBASIC16.34■□□□□ 0.21
SLC1A6P48664 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.34■□□□□ 0.21
SLC1A6P48664 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC1A6P48664 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.34■□□□□ 0.21
SLC1A6P48664 AC074051.2-201ENST00000565115 352 ntBASIC16.34■□□□□ 0.21
SLC1A6P48664 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC1A6P48664 AP002414.4-201ENST00000589764 1148 ntBASIC16.34■□□□□ 0.21
SLC1A6P48664 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.34■□□□□ 0.21
SLC1A6P48664 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SLC1A6P48664 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.34■□□□□ 0.21
SLC1A6P48664 AC064862.7-201ENST00000604520 867 ntBASIC16.34■□□□□ 0.21
SLC1A6P48664 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.34■□□□□ 0.21
SLC1A6P48664 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.34■□□□□ 0.21
SLC1A6P48664 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC1A6P48664 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC1A6P48664 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC1A6P48664 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC1A6P48664 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC1A6P48664 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC1A6P48664 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.34■□□□□ 0.21
SLC1A6P48664 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SLC1A6P48664 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
SLC1A6P48664 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC1A6P48664 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC1A6P48664 PRAL-201ENST00000624952 3286 ntBASIC16.34■□□□□ 0.21
SLC1A6P48664 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC1A6P48664 AC022532.1-201ENST00000624563 1728 ntBASIC16.33■□□□□ 0.21
SLC1A6P48664 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.33■□□□□ 0.21
SLC1A6P48664 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SLC1A6P48664 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC1A6P48664 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC1A6P48664 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
SLC1A6P48664 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC1A6P48664 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SLC1A6P48664 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SLC1A6P48664 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC1A6P48664 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLC1A6P48664 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A6P48664 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A6P48664 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A6P48664 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC1A6P48664 PRYP5-201ENST00000451909 266 ntBASIC16.33■□□□□ 0.2
SLC1A6P48664 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC1A6P48664 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC1A6P48664 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC1A6P48664 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A6P48664 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A6P48664 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SLC1A6P48664 NCF1C-201ENST00000438382 1427 ntBASIC16.33■□□□□ 0.2
SLC1A6P48664 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC1A6P48664 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
SLC1A6P48664 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A6P48664 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A6P48664 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A6P48664 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.33■□□□□ 0.2
SLC1A6P48664 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A6P48664 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A6P48664 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A6P48664 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A6P48664 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A6P48664 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC1A6P48664 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A6P48664 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A6P48664 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC1A6P48664 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A6P48664 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A6P48664 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A6P48664 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A6P48664 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SLC1A6P48664 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A6P48664 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A6P48664 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A6P48664 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A6P48664 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A6P48664 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC1A6P48664 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A6P48664 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A6P48664 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A6P48664 PAWRP1-201ENST00000451083 565 ntBASIC16.32■□□□□ 0.2
SLC1A6P48664 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.32■□□□□ 0.2
SLC1A6P48664 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC1A6P48664 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
SLC1A6P48664 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC1A6P48664 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A6P48664 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A6P48664 RN7SL850P-201ENST00000579959 291 ntBASIC16.32■□□□□ 0.2
SLC1A6P48664 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SLC1A6P48664 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC1A6P48664 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A6P48664 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC1A6P48664 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC1A6P48664 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SLC1A6P48664 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms