Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP6V1AP38606 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP6V1AP38606 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
ATP6V1AP38606 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
ATP6V1AP38606 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATP6V1AP38606 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.91■□□□□ 0.94
ATP6V1AP38606 RPL28-204ENST00000431533 590 ntTSL 2 BASIC20.91■□□□□ 0.94
ATP6V1AP38606 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC20.91■□□□□ 0.94
ATP6V1AP38606 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC20.91■□□□□ 0.94
ATP6V1AP38606 AC234783.1-201ENST00000441761 496 ntBASIC20.91■□□□□ 0.94
ATP6V1AP38606 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.91■□□□□ 0.94
ATP6V1AP38606 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC20.91■□□□□ 0.94
ATP6V1AP38606 AC007389.4-201ENST00000454674 793 ntBASIC20.91■□□□□ 0.94
ATP6V1AP38606 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC20.91■□□□□ 0.94
ATP6V1AP38606 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC20.91■□□□□ 0.94
ATP6V1AP38606 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP6V1AP38606 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC20.91■□□□□ 0.94
ATP6V1AP38606 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATP6V1AP38606 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
ATP6V1AP38606 RPL28-206ENST00000558752 671 ntTSL 3 BASIC20.91■□□□□ 0.94
ATP6V1AP38606 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC20.91■□□□□ 0.94
ATP6V1AP38606 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATP6V1AP38606 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.91■□□□□ 0.94
ATP6V1AP38606 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.91■□□□□ 0.94
ATP6V1AP38606 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
ATP6V1AP38606 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.91■□□□□ 0.94
ATP6V1AP38606 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP6V1AP38606 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
ATP6V1AP38606 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ATP6V1AP38606 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP6V1AP38606 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP6V1AP38606 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP6V1AP38606 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP6V1AP38606 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.9■□□□□ 0.94
ATP6V1AP38606 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP6V1AP38606 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP6V1AP38606 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP6V1AP38606 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
ATP6V1AP38606 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP6V1AP38606 HIST1H2BPS3-201ENST00000419683 341 ntBASIC20.9■□□□□ 0.94
ATP6V1AP38606 AL139010.1-201ENST00000454878 894 ntBASIC20.9■□□□□ 0.94
ATP6V1AP38606 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC20.9■□□□□ 0.94
ATP6V1AP38606 SNX29P1-201ENST00000548357 1007 ntBASIC20.9■□□□□ 0.94
ATP6V1AP38606 ORC6-206ENST00000568364 888 ntTSL 5 BASIC20.9■□□□□ 0.94
ATP6V1AP38606 COX11-210ENST00000639671 696 ntBASIC20.9■□□□□ 0.94
ATP6V1AP38606 AL139011.1-202ENST00000642063 584 ntBASIC20.9■□□□□ 0.94
ATP6V1AP38606 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP6V1AP38606 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP6V1AP38606 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP6V1AP38606 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP6V1AP38606 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP6V1AP38606 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
ATP6V1AP38606 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.9■□□□□ 0.94
ATP6V1AP38606 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ATP6V1AP38606 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP6V1AP38606 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.9■□□□□ 0.94
ATP6V1AP38606 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP6V1AP38606 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATP6V1AP38606 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATP6V1AP38606 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATP6V1AP38606 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATP6V1AP38606 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ATP6V1AP38606 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
ATP6V1AP38606 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP6V1AP38606 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
ATP6V1AP38606 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP6V1AP38606 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC20.89■□□□□ 0.93
ATP6V1AP38606 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.89■□□□□ 0.93
ATP6V1AP38606 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC20.89■□□□□ 0.93
ATP6V1AP38606 KRT223P-202ENST00000449164 1292 ntBASIC20.89■□□□□ 0.93
ATP6V1AP38606 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC20.89■□□□□ 0.93
ATP6V1AP38606 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.89■□□□□ 0.93
ATP6V1AP38606 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ATP6V1AP38606 AC092552.1-201ENST00000547243 906 ntBASIC20.89■□□□□ 0.93
ATP6V1AP38606 AP005482.1-201ENST00000563722 1273 ntBASIC20.89■□□□□ 0.93
ATP6V1AP38606 AC092337.1-201ENST00000568699 1129 ntBASIC20.89■□□□□ 0.93
ATP6V1AP38606 TMEM261P1-201ENST00000604899 340 ntBASIC20.89■□□□□ 0.93
ATP6V1AP38606 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC20.89■□□□□ 0.93
ATP6V1AP38606 AC067852.2-201ENST00000590513 2313 ntBASIC20.89■□□□□ 0.93
ATP6V1AP38606 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP6V1AP38606 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP6V1AP38606 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20.89■□□□□ 0.93
ATP6V1AP38606 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP6V1AP38606 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
ATP6V1AP38606 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP6V1AP38606 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.89■□□□□ 0.93
ATP6V1AP38606 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP6V1AP38606 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP6V1AP38606 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP6V1AP38606 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATP6V1AP38606 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP6V1AP38606 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP6V1AP38606 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
ATP6V1AP38606 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP6V1AP38606 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP6V1AP38606 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
ATP6V1AP38606 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP6V1AP38606 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP6V1AP38606 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP6V1AP38606 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms