Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.68■□□□□ 0.26
RETP07949 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.67■□□□□ 0.26
RETP07949 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.67■□□□□ 0.26
RETP07949 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RETP07949 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RETP07949 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RETP07949 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
RETP07949 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RETP07949 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RETP07949 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.67■□□□□ 0.26
RETP07949 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.67■□□□□ 0.26
RETP07949 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RETP07949 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
RETP07949 MIR1909-201ENST00000411312 80 ntBASIC16.67■□□□□ 0.26
RETP07949 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.67■□□□□ 0.26
RETP07949 ACA64.2-201ENST00000459014 129 ntBASIC16.67■□□□□ 0.26
RETP07949 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RETP07949 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.67■□□□□ 0.26
RETP07949 API5-211ENST00000534695 560 ntTSL 5 BASIC16.67■□□□□ 0.26
RETP07949 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.67■□□□□ 0.26
RETP07949 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RETP07949 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.67■□□□□ 0.26
RETP07949 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.67■□□□□ 0.26
RETP07949 AC003101.2-201ENST00000612557 442 ntBASIC16.67■□□□□ 0.26
RETP07949 AC007967.4-201ENST00000614700 386 ntBASIC16.67■□□□□ 0.26
RETP07949 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.67■□□□□ 0.26
RETP07949 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RETP07949 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RETP07949 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RETP07949 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RETP07949 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RETP07949 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RETP07949 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RETP07949 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RETP07949 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RETP07949 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RETP07949 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RETP07949 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
RETP07949 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.66■□□□□ 0.26
RETP07949 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.66■□□□□ 0.26
RETP07949 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RETP07949 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.66■□□□□ 0.26
RETP07949 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RETP07949 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RETP07949 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RETP07949 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.66■□□□□ 0.26
RETP07949 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RETP07949 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RETP07949 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RETP07949 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RETP07949 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RETP07949 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RETP07949 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.66■□□□□ 0.26
RETP07949 AC009477.1-201ENST00000452936 217 ntBASIC16.66■□□□□ 0.26
RETP07949 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RETP07949 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RETP07949 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RETP07949 AC016396.2-201ENST00000562575 1417 ntBASIC16.66■□□□□ 0.26
RETP07949 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
RETP07949 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.66■□□□□ 0.26
RETP07949 AC084346.2-201ENST00000607097 949 ntBASIC16.66■□□□□ 0.26
RETP07949 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RETP07949 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RETP07949 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.66■□□□□ 0.26
RETP07949 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.66■□□□□ 0.26
RETP07949 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RETP07949 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RETP07949 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RETP07949 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RETP07949 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.65■□□□□ 0.26
RETP07949 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RETP07949 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RETP07949 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
RETP07949 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RETP07949 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.65■□□□□ 0.26
RETP07949 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RETP07949 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RETP07949 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
RETP07949 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RETP07949 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RETP07949 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RETP07949 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RETP07949 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RETP07949 AP006294.1-201ENST00000415407 339 ntBASIC16.65■□□□□ 0.26
RETP07949 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.65■□□□□ 0.26
RETP07949 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RETP07949 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.65■□□□□ 0.26
RETP07949 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.65■□□□□ 0.26
RETP07949 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RETP07949 INE1-201ENST00000456273 945 ntBASIC16.65■□□□□ 0.26
RETP07949 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RETP07949 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.65■□□□□ 0.26
RETP07949 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RETP07949 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RETP07949 RARRES2P9-201ENST00000565168 469 ntBASIC16.65■□□□□ 0.26
RETP07949 AC106886.1-201ENST00000568660 600 ntBASIC16.65■□□□□ 0.26
RETP07949 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.65■□□□□ 0.26
RETP07949 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.65■□□□□ 0.26
RETP07949 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RETP07949 IGHV3-72-202ENST00000621503 303 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms