Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.72■□□□□ 0.75
COL1A1P02452 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC19.72■□□□□ 0.75
COL1A1P02452 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A1P02452 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC19.72■□□□□ 0.75
COL1A1P02452 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A1P02452 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
COL1A1P02452 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL1A1P02452 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL1A1P02452 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
COL1A1P02452 FLJ38576-201ENST00000623820 2459 ntBASIC19.71■□□□□ 0.75
COL1A1P02452 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL1A1P02452 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL1A1P02452 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
COL1A1P02452 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
COL1A1P02452 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
COL1A1P02452 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.71■□□□□ 0.75
COL1A1P02452 BTBD7P1-201ENST00000447253 1453 ntBASIC19.71■□□□□ 0.75
COL1A1P02452 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.71■□□□□ 0.75
COL1A1P02452 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL1A1P02452 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
COL1A1P02452 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.71■□□□□ 0.75
COL1A1P02452 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL1A1P02452 AC098614.1-201ENST00000368528 745 ntBASIC19.71■□□□□ 0.75
COL1A1P02452 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.71■□□□□ 0.75
COL1A1P02452 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.71■□□□□ 0.75
COL1A1P02452 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.71■□□□□ 0.75
COL1A1P02452 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC19.71■□□□□ 0.75
COL1A1P02452 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC19.71■□□□□ 0.75
COL1A1P02452 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL1A1P02452 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
COL1A1P02452 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.71■□□□□ 0.75
COL1A1P02452 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.71■□□□□ 0.75
COL1A1P02452 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.71■□□□□ 0.75
COL1A1P02452 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A1P02452 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A1P02452 U82695.1-201ENST00000635752 1889 ntBASIC19.7■□□□□ 0.74
COL1A1P02452 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A1P02452 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A1P02452 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.7■□□□□ 0.74
COL1A1P02452 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A1P02452 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.7■□□□□ 0.74
COL1A1P02452 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A1P02452 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.7■□□□□ 0.74
COL1A1P02452 IGHV3-71-201ENST00000523324 359 ntBASIC19.7■□□□□ 0.74
COL1A1P02452 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.7■□□□□ 0.74
COL1A1P02452 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.7■□□□□ 0.74
COL1A1P02452 AC024267.1-201ENST00000582320 895 ntBASIC19.7■□□□□ 0.74
COL1A1P02452 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.7■□□□□ 0.74
COL1A1P02452 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
COL1A1P02452 AL136982.4-201ENST00000437689 1740 ntBASIC19.7■□□□□ 0.74
COL1A1P02452 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.7■□□□□ 0.74
COL1A1P02452 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A1P02452 AC138969.3-201ENST00000546612 1459 ntBASIC19.7■□□□□ 0.74
COL1A1P02452 AC138932.2-201ENST00000548268 1459 ntBASIC19.7■□□□□ 0.74
COL1A1P02452 AC126755.4-201ENST00000549796 1459 ntBASIC19.7■□□□□ 0.74
COL1A1P02452 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A1P02452 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A1P02452 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.69■□□□□ 0.74
COL1A1P02452 AC011676.5-201ENST00000624864 2660 ntBASIC19.69■□□□□ 0.74
COL1A1P02452 AL391825.1-201ENST00000457671 1364 ntBASIC19.69■□□□□ 0.74
COL1A1P02452 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.69■□□□□ 0.74
COL1A1P02452 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A1P02452 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.69■□□□□ 0.74
COL1A1P02452 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A1P02452 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A1P02452 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A1P02452 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.69■□□□□ 0.74
COL1A1P02452 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A1P02452 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.69■□□□□ 0.74
COL1A1P02452 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A1P02452 SPDYE17-201ENST00000412399 783 ntBASIC19.69■□□□□ 0.74
COL1A1P02452 DFFBP1-201ENST00000433250 979 ntBASIC19.69■□□□□ 0.74
COL1A1P02452 AL353779.1-201ENST00000434793 351 ntBASIC19.69■□□□□ 0.74
COL1A1P02452 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.69■□□□□ 0.74
COL1A1P02452 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A1P02452 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A1P02452 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
COL1A1P02452 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
COL1A1P02452 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A1P02452 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
COL1A1P02452 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
COL1A1P02452 AC005622.1-201ENST00000636801 1703 ntBASIC19.69■□□□□ 0.74
COL1A1P02452 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A1P02452 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A1P02452 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.69■□□□□ 0.74
COL1A1P02452 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
COL1A1P02452 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
COL1A1P02452 AGGF1P2-201ENST00000426656 2106 ntBASIC19.69■□□□□ 0.74
COL1A1P02452 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A1P02452 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.69■□□□□ 0.74
COL1A1P02452 KRT8P12-202ENST00000472924 1397 ntBASIC19.69■□□□□ 0.74
COL1A1P02452 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL1A1P02452 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL1A1P02452 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL1A1P02452 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL1A1P02452 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL1A1P02452 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL1A1P02452 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
COL1A1P02452 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL1A1P02452 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms