Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CBX6O95503 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
CBX6O95503 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CBX6O95503 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CBX6O95503 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CBX6O95503 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CBX6O95503 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CBX6O95503 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CBX6O95503 AC010460.3-201ENST00000511359 1579 ntBASIC16.6■□□□□ 0.25
CBX6O95503 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CBX6O95503 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CBX6O95503 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.59■□□□□ 0.25
CBX6O95503 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CBX6O95503 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.59■□□□□ 0.25
CBX6O95503 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.59■□□□□ 0.25
CBX6O95503 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CBX6O95503 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CBX6O95503 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CBX6O95503 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CBX6O95503 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CBX6O95503 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CBX6O95503 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CBX6O95503 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CBX6O95503 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CBX6O95503 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CBX6O95503 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CBX6O95503 AL031284.1-201ENST00000419297 478 ntBASIC16.59■□□□□ 0.25
CBX6O95503 MINOS1P3-201ENST00000457048 203 ntBASIC16.59■□□□□ 0.25
CBX6O95503 AC091607.1-201ENST00000490318 1060 ntBASIC16.59■□□□□ 0.25
CBX6O95503 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CBX6O95503 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.59■□□□□ 0.25
CBX6O95503 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.59■□□□□ 0.25
CBX6O95503 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.59■□□□□ 0.25
CBX6O95503 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.59■□□□□ 0.25
CBX6O95503 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CBX6O95503 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CBX6O95503 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.59■□□□□ 0.25
CBX6O95503 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CBX6O95503 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CBX6O95503 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CBX6O95503 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CBX6O95503 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CBX6O95503 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.59■□□□□ 0.25
CBX6O95503 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CBX6O95503 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CBX6O95503 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.58■□□□□ 0.25
CBX6O95503 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CBX6O95503 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CBX6O95503 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.58■□□□□ 0.25
CBX6O95503 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CBX6O95503 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.58■□□□□ 0.25
CBX6O95503 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CBX6O95503 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
CBX6O95503 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.58■□□□□ 0.25
CBX6O95503 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.58■□□□□ 0.25
CBX6O95503 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CBX6O95503 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CBX6O95503 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CBX6O95503 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.58■□□□□ 0.24
CBX6O95503 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.58■□□□□ 0.24
CBX6O95503 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.58■□□□□ 0.24
CBX6O95503 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.58■□□□□ 0.24
CBX6O95503 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.58■□□□□ 0.24
CBX6O95503 AP002490.2-201ENST00000524791 560 ntBASIC16.58■□□□□ 0.24
CBX6O95503 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.58■□□□□ 0.24
CBX6O95503 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.58■□□□□ 0.24
CBX6O95503 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CBX6O95503 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.58■□□□□ 0.24
CBX6O95503 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.58■□□□□ 0.24
CBX6O95503 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.58■□□□□ 0.24
CBX6O95503 AC011840.4-201ENST00000578471 627 ntBASIC16.58■□□□□ 0.24
CBX6O95503 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CBX6O95503 AC019129.2-201ENST00000609837 1235 ntBASIC16.58■□□□□ 0.24
CBX6O95503 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.58■□□□□ 0.24
CBX6O95503 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CBX6O95503 AL353692.3-201ENST00000407031 1396 ntBASIC16.58■□□□□ 0.24
CBX6O95503 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CBX6O95503 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CBX6O95503 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CBX6O95503 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CBX6O95503 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CBX6O95503 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.58■□□□□ 0.24
CBX6O95503 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CBX6O95503 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CBX6O95503 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.58■□□□□ 0.24
CBX6O95503 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
CBX6O95503 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
CBX6O95503 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CBX6O95503 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CBX6O95503 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CBX6O95503 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CBX6O95503 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CBX6O95503 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CBX6O95503 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CBX6O95503 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CBX6O95503 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CBX6O95503 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.57■□□□□ 0.24
CBX6O95503 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.57■□□□□ 0.24
CBX6O95503 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CBX6O95503 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms