Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
RAPGEF3O95398 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
RAPGEF3O95398 AC092053.1-201ENST00000605787 1936 ntBASIC24.39■■□□□ 1.49
RAPGEF3O95398 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RAPGEF3O95398 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RAPGEF3O95398 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC24.39■■□□□ 1.49
RAPGEF3O95398 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAPGEF3O95398 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAPGEF3O95398 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAPGEF3O95398 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
RAPGEF3O95398 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAPGEF3O95398 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAPGEF3O95398 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC24.38■■□□□ 1.49
RAPGEF3O95398 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAPGEF3O95398 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAPGEF3O95398 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAPGEF3O95398 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
RAPGEF3O95398 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC24.38■■□□□ 1.49
RAPGEF3O95398 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC24.38■■□□□ 1.49
RAPGEF3O95398 MPRIPP1-201ENST00000452433 1089 ntBASIC24.38■■□□□ 1.49
RAPGEF3O95398 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC24.38■■□□□ 1.49
RAPGEF3O95398 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC24.38■■□□□ 1.49
RAPGEF3O95398 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC24.38■■□□□ 1.49
RAPGEF3O95398 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC24.38■■□□□ 1.49
RAPGEF3O95398 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RAPGEF3O95398 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC24.38■■□□□ 1.49
RAPGEF3O95398 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RAPGEF3O95398 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC24.38■■□□□ 1.49
RAPGEF3O95398 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC24.38■■□□□ 1.49
RAPGEF3O95398 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC24.38■■□□□ 1.49
RAPGEF3O95398 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAPGEF3O95398 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
RAPGEF3O95398 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
RAPGEF3O95398 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
RAPGEF3O95398 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC24.38■■□□□ 1.49
RAPGEF3O95398 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
RAPGEF3O95398 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAPGEF3O95398 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RAPGEF3O95398 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RAPGEF3O95398 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RAPGEF3O95398 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RAPGEF3O95398 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RAPGEF3O95398 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RAPGEF3O95398 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RAPGEF3O95398 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC24.37■■□□□ 1.49
RAPGEF3O95398 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RAPGEF3O95398 AC012441.1-201ENST00000446669 685 ntBASIC24.37■■□□□ 1.49
RAPGEF3O95398 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC24.37■■□□□ 1.49
RAPGEF3O95398 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC24.37■■□□□ 1.49
RAPGEF3O95398 GNRHR2-203ENST00000581100 1187 ntBASIC24.37■■□□□ 1.49
RAPGEF3O95398 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RAPGEF3O95398 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RAPGEF3O95398 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RAPGEF3O95398 INTS4P2-202ENST00000614726 2019 ntBASIC24.37■■□□□ 1.49
RAPGEF3O95398 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC24.37■■□□□ 1.49
RAPGEF3O95398 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RAPGEF3O95398 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC24.36■■□□□ 1.49
RAPGEF3O95398 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RAPGEF3O95398 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
RAPGEF3O95398 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RAPGEF3O95398 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
RAPGEF3O95398 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RAPGEF3O95398 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC24.36■■□□□ 1.49
RAPGEF3O95398 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC24.36■■□□□ 1.49
RAPGEF3O95398 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RAPGEF3O95398 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC24.36■■□□□ 1.49
RAPGEF3O95398 AC074338.1-201ENST00000416825 156 ntBASIC24.36■■□□□ 1.49
RAPGEF3O95398 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC24.36■■□□□ 1.49
RAPGEF3O95398 AKR7A2P1-201ENST00000460134 915 ntBASIC24.36■■□□□ 1.49
RAPGEF3O95398 ARTN-209ENST00000479128 471 ntTSL 3 BASIC24.36■■□□□ 1.49
RAPGEF3O95398 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC24.36■■□□□ 1.49
RAPGEF3O95398 MIR4706-201ENST00000582134 82 ntBASIC24.36■■□□□ 1.49
RAPGEF3O95398 U62317.3-201ENST00000608319 855 ntBASIC24.36■■□□□ 1.49
RAPGEF3O95398 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC24.36■■□□□ 1.49
RAPGEF3O95398 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC24.36■■□□□ 1.49
RAPGEF3O95398 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RAPGEF3O95398 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
RAPGEF3O95398 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
RAPGEF3O95398 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RAPGEF3O95398 AC134312.5-201ENST00000568031 1313 ntBASIC24.35■■□□□ 1.49
RAPGEF3O95398 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RAPGEF3O95398 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC24.35■■□□□ 1.49
RAPGEF3O95398 LINC02012-201ENST00000608206 1725 ntBASIC24.35■■□□□ 1.49
RAPGEF3O95398 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC24.35■■□□□ 1.49
RAPGEF3O95398 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
RAPGEF3O95398 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
RAPGEF3O95398 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RAPGEF3O95398 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC24.35■■□□□ 1.49
RAPGEF3O95398 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RAPGEF3O95398 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
RAPGEF3O95398 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RAPGEF3O95398 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RAPGEF3O95398 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RAPGEF3O95398 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RAPGEF3O95398 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
RAPGEF3O95398 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC24.35■■□□□ 1.49
RAPGEF3O95398 AC134915.1-201ENST00000426461 574 ntBASIC24.35■■□□□ 1.49
RAPGEF3O95398 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
RAPGEF3O95398 AC124947.2-201ENST00000547118 1133 ntBASIC24.35■■□□□ 1.49
RAPGEF3O95398 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms