Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1BO75841 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1BO75841 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1BO75841 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
UPK1BO75841 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
UPK1BO75841 SLC29A4P1-201ENST00000398760 971 ntBASIC14.46□□□□□ -0.09
UPK1BO75841 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.46□□□□□ -0.09
UPK1BO75841 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
UPK1BO75841 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.46□□□□□ -0.09
UPK1BO75841 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.46□□□□□ -0.09
UPK1BO75841 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.46□□□□□ -0.09
UPK1BO75841 AC008403.3-201ENST00000598924 454 ntBASIC14.46□□□□□ -0.09
UPK1BO75841 AC110285.5-201ENST00000611501 352 ntBASIC14.46□□□□□ -0.09
UPK1BO75841 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1BO75841 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
UPK1BO75841 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
UPK1BO75841 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
UPK1BO75841 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
UPK1BO75841 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.46□□□□□ -0.09
UPK1BO75841 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UPK1BO75841 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
UPK1BO75841 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
UPK1BO75841 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.46□□□□□ -0.1
UPK1BO75841 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.46□□□□□ -0.1
UPK1BO75841 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
UPK1BO75841 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
UPK1BO75841 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
UPK1BO75841 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
UPK1BO75841 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
UPK1BO75841 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
UPK1BO75841 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
UPK1BO75841 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
UPK1BO75841 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
UPK1BO75841 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.45□□□□□ -0.1
UPK1BO75841 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.45□□□□□ -0.1
UPK1BO75841 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
UPK1BO75841 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 ZNRF2P3-201ENST00000424200 374 ntBASIC14.45□□□□□ -0.1
UPK1BO75841 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 POU5F1P6-201ENST00000466990 990 ntBASIC14.45□□□□□ -0.1
UPK1BO75841 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.45□□□□□ -0.1
UPK1BO75841 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.45□□□□□ -0.1
UPK1BO75841 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
UPK1BO75841 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.45□□□□□ -0.1
UPK1BO75841 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.45□□□□□ -0.1
UPK1BO75841 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.45□□□□□ -0.1
UPK1BO75841 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.45□□□□□ -0.1
UPK1BO75841 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 AP003680.1-201ENST00000598970 3660 ntBASIC14.45□□□□□ -0.1
UPK1BO75841 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
UPK1BO75841 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
UPK1BO75841 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
UPK1BO75841 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
UPK1BO75841 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.45□□□□□ -0.1
UPK1BO75841 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UPK1BO75841 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.45□□□□□ -0.1
UPK1BO75841 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
UPK1BO75841 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
UPK1BO75841 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
UPK1BO75841 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1BO75841 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
UPK1BO75841 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1BO75841 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
UPK1BO75841 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.44□□□□□ -0.1
UPK1BO75841 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.44□□□□□ -0.1
UPK1BO75841 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK1BO75841 AC006504.5-208ENST00000588784 2401 ntBASIC14.44□□□□□ -0.1
UPK1BO75841 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.44□□□□□ -0.1
UPK1BO75841 AC009090.5-201ENST00000624886 2285 ntBASIC14.44□□□□□ -0.1
UPK1BO75841 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms