Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM3O75382 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM3O75382 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM3O75382 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM3O75382 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM3O75382 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIM3O75382 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM3O75382 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
TRIM3O75382 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM3O75382 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIM3O75382 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
TRIM3O75382 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM3O75382 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM3O75382 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM3O75382 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRIM3O75382 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM3O75382 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM3O75382 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM3O75382 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM3O75382 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.5■□□□□ 0.07
TRIM3O75382 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRIM3O75382 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM3O75382 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM3O75382 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM3O75382 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIM3O75382 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIM3O75382 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM3O75382 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM3O75382 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM3O75382 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TRIM3O75382 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM3O75382 MCCD1P2-201ENST00000423228 335 ntBASIC15.5■□□□□ 0.07
TRIM3O75382 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.5■□□□□ 0.07
TRIM3O75382 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIM3O75382 AC124947.2-201ENST00000547118 1133 ntBASIC15.5■□□□□ 0.07
TRIM3O75382 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIM3O75382 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.5■□□□□ 0.07
TRIM3O75382 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIM3O75382 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM3O75382 AL513190.1-201ENST00000621254 727 ntBASIC15.5■□□□□ 0.07
TRIM3O75382 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIM3O75382 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM3O75382 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM3O75382 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM3O75382 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM3O75382 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM3O75382 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIM3O75382 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM3O75382 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM3O75382 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM3O75382 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.49■□□□□ 0.07
TRIM3O75382 AC126755.1-201ENST00000525846 6405 ntBASIC15.49■□□□□ 0.07
TRIM3O75382 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TRIM3O75382 BCAR1-209ENST00000546196 1340 ntBASIC15.49■□□□□ 0.07
TRIM3O75382 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.49■□□□□ 0.07
TRIM3O75382 FRMD8P1-201ENST00000440433 1524 ntBASIC15.49■□□□□ 0.07
TRIM3O75382 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.49■□□□□ 0.07
TRIM3O75382 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TRIM3O75382 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM3O75382 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM3O75382 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM3O75382 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.49■□□□□ 0.07
TRIM3O75382 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.49■□□□□ 0.07
TRIM3O75382 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM3O75382 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TRIM3O75382 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.49■□□□□ 0.07
TRIM3O75382 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM3O75382 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.49■□□□□ 0.07
TRIM3O75382 DNAJB3-201ENST00000446806 729 ntBASIC15.49■□□□□ 0.07
TRIM3O75382 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.49■□□□□ 0.07
TRIM3O75382 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.49■□□□□ 0.07
TRIM3O75382 KRT19P2-202ENST00000557173 1012 ntBASIC15.49■□□□□ 0.07
TRIM3O75382 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.49■□□□□ 0.07
TRIM3O75382 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM3O75382 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.49■□□□□ 0.07
TRIM3O75382 MTDHP5-201ENST00000598980 586 ntBASIC15.49■□□□□ 0.07
TRIM3O75382 AC023141.13-201ENST00000604991 943 ntBASIC15.49■□□□□ 0.07
TRIM3O75382 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.49■□□□□ 0.07
TRIM3O75382 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.49■□□□□ 0.07
TRIM3O75382 AC007064.4-201ENST00000637740 555 ntBASIC15.49■□□□□ 0.07
TRIM3O75382 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM3O75382 AC060834.1-201ENST00000443027 2032 ntBASIC15.49■□□□□ 0.07
TRIM3O75382 AC063926.3-201ENST00000624734 5658 ntBASIC15.49■□□□□ 0.07
TRIM3O75382 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM3O75382 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM3O75382 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRIM3O75382 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM3O75382 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM3O75382 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.49■□□□□ 0.07
TRIM3O75382 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM3O75382 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM3O75382 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.48■□□□□ 0.07
TRIM3O75382 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM3O75382 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM3O75382 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM3O75382 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM3O75382 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM3O75382 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.48■□□□□ 0.07
TRIM3O75382 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM3O75382 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms