Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.76■□□□□ 0.27
KDELR3O43731 KRT18P32-201ENST00000424695 1287 ntBASIC16.76■□□□□ 0.27
KDELR3O43731 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.76■□□□□ 0.27
KDELR3O43731 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDELR3O43731 SLC25A39P2-201ENST00000537614 270 ntBASIC16.76■□□□□ 0.27
KDELR3O43731 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDELR3O43731 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.76■□□□□ 0.27
KDELR3O43731 SPTSSB-204ENST00000617024 1292 ntBASIC16.76■□□□□ 0.27
KDELR3O43731 AC009093.7-201ENST00000623853 1223 ntBASIC16.76■□□□□ 0.27
KDELR3O43731 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDELR3O43731 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.76■□□□□ 0.27
KDELR3O43731 OR6D1P-203ENST00000641209 4860 ntBASIC16.76■□□□□ 0.27
KDELR3O43731 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDELR3O43731 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.76■□□□□ 0.27
KDELR3O43731 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.76■□□□□ 0.27
KDELR3O43731 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDELR3O43731 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDELR3O43731 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDELR3O43731 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
KDELR3O43731 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KDELR3O43731 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
KDELR3O43731 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.76■□□□□ 0.27
KDELR3O43731 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KDELR3O43731 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.76■□□□□ 0.27
KDELR3O43731 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
KDELR3O43731 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KDELR3O43731 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
KDELR3O43731 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDELR3O43731 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDELR3O43731 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.75■□□□□ 0.27
KDELR3O43731 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
KDELR3O43731 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
KDELR3O43731 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
KDELR3O43731 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDELR3O43731 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDELR3O43731 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
KDELR3O43731 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.75■□□□□ 0.27
KDELR3O43731 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
KDELR3O43731 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
KDELR3O43731 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDELR3O43731 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDELR3O43731 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
KDELR3O43731 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
KDELR3O43731 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDELR3O43731 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDELR3O43731 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDELR3O43731 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDELR3O43731 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.75■□□□□ 0.27
KDELR3O43731 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.75■□□□□ 0.27
KDELR3O43731 AC098859.1-201ENST00000502915 1238 ntBASIC16.75■□□□□ 0.27
KDELR3O43731 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.75■□□□□ 0.27
KDELR3O43731 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.75■□□□□ 0.27
KDELR3O43731 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.75■□□□□ 0.27
KDELR3O43731 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.75■□□□□ 0.27
KDELR3O43731 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDELR3O43731 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
KDELR3O43731 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDELR3O43731 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.75■□□□□ 0.27
KDELR3O43731 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDELR3O43731 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.75■□□□□ 0.27
KDELR3O43731 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDELR3O43731 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDELR3O43731 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
KDELR3O43731 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
KDELR3O43731 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDELR3O43731 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDELR3O43731 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
KDELR3O43731 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDELR3O43731 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.74■□□□□ 0.27
KDELR3O43731 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDELR3O43731 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KDELR3O43731 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDELR3O43731 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
KDELR3O43731 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.74■□□□□ 0.27
KDELR3O43731 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDELR3O43731 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KDELR3O43731 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDELR3O43731 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDELR3O43731 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
KDELR3O43731 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.74■□□□□ 0.27
KDELR3O43731 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.74■□□□□ 0.27
KDELR3O43731 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.74■□□□□ 0.27
KDELR3O43731 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KDELR3O43731 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDELR3O43731 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.74■□□□□ 0.27
KDELR3O43731 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.74■□□□□ 0.27
KDELR3O43731 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
KDELR3O43731 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KDELR3O43731 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDELR3O43731 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDELR3O43731 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.74■□□□□ 0.27
KDELR3O43731 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KDELR3O43731 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
KDELR3O43731 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDELR3O43731 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDELR3O43731 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDELR3O43731 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
KDELR3O43731 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
KDELR3O43731 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KDELR3O43731 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms