Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.58■□□□□ 0.57
ACTN4O43707 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ACTN4O43707 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.58■□□□□ 0.57
ACTN4O43707 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.58■□□□□ 0.57
ACTN4O43707 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
ACTN4O43707 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.58■□□□□ 0.57
ACTN4O43707 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ACTN4O43707 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.58■□□□□ 0.57
ACTN4O43707 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ACTN4O43707 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
ACTN4O43707 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ACTN4O43707 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
ACTN4O43707 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.58■□□□□ 0.56
ACTN4O43707 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.58■□□□□ 0.56
ACTN4O43707 AC009947.1-201ENST00000444350 727 ntBASIC18.58■□□□□ 0.56
ACTN4O43707 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
ACTN4O43707 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.58■□□□□ 0.56
ACTN4O43707 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.58■□□□□ 0.56
ACTN4O43707 MIR4751-201ENST00000578027 74 ntBASIC18.58■□□□□ 0.56
ACTN4O43707 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.58■□□□□ 0.56
ACTN4O43707 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.58■□□□□ 0.56
ACTN4O43707 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.58■□□□□ 0.56
ACTN4O43707 AC116407.3-201ENST00000623905 1129 ntBASIC18.58■□□□□ 0.56
ACTN4O43707 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.58■□□□□ 0.56
ACTN4O43707 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.58■□□□□ 0.56
ACTN4O43707 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
ACTN4O43707 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ACTN4O43707 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
ACTN4O43707 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ACTN4O43707 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ACTN4O43707 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.58■□□□□ 0.56
ACTN4O43707 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ACTN4O43707 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ACTN4O43707 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ACTN4O43707 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.58■□□□□ 0.56
ACTN4O43707 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
ACTN4O43707 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.57■□□□□ 0.56
ACTN4O43707 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.57■□□□□ 0.56
ACTN4O43707 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ACTN4O43707 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACTN4O43707 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACTN4O43707 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.57■□□□□ 0.56
ACTN4O43707 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACTN4O43707 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ACTN4O43707 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ACTN4O43707 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACTN4O43707 AC010491.1-201ENST00000563101 2797 ntBASIC18.57■□□□□ 0.56
ACTN4O43707 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACTN4O43707 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.57■□□□□ 0.56
ACTN4O43707 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACTN4O43707 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.57■□□□□ 0.56
ACTN4O43707 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ACTN4O43707 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ACTN4O43707 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.57■□□□□ 0.56
ACTN4O43707 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.57■□□□□ 0.56
ACTN4O43707 UNC93B6-202ENST00000528242 690 ntBASIC18.57■□□□□ 0.56
ACTN4O43707 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
ACTN4O43707 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ACTN4O43707 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.57■□□□□ 0.56
ACTN4O43707 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ACTN4O43707 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.57■□□□□ 0.56
ACTN4O43707 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.57■□□□□ 0.56
ACTN4O43707 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ACTN4O43707 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.57■□□□□ 0.56
ACTN4O43707 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.57■□□□□ 0.56
ACTN4O43707 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACTN4O43707 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.57■□□□□ 0.56
ACTN4O43707 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.57■□□□□ 0.56
ACTN4O43707 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACTN4O43707 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACTN4O43707 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACTN4O43707 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACTN4O43707 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ACTN4O43707 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
ACTN4O43707 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.56■□□□□ 0.56
ACTN4O43707 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ACTN4O43707 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
ACTN4O43707 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ACTN4O43707 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ACTN4O43707 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.56■□□□□ 0.56
ACTN4O43707 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ACTN4O43707 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ACTN4O43707 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ACTN4O43707 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.56■□□□□ 0.56
ACTN4O43707 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.56■□□□□ 0.56
ACTN4O43707 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ACTN4O43707 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.56■□□□□ 0.56
ACTN4O43707 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
ACTN4O43707 VN2R19P-201ENST00000442399 1052 ntBASIC18.56■□□□□ 0.56
ACTN4O43707 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.56■□□□□ 0.56
ACTN4O43707 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.56■□□□□ 0.56
ACTN4O43707 IGHV3-22-201ENST00000520721 359 ntBASIC18.56■□□□□ 0.56
ACTN4O43707 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ACTN4O43707 SLC25A6P4-201ENST00000586535 553 ntBASIC18.56■□□□□ 0.56
ACTN4O43707 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.56■□□□□ 0.56
ACTN4O43707 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.56■□□□□ 0.56
ACTN4O43707 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ACTN4O43707 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ACTN4O43707 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ACTN4O43707 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms