Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PIK3C2AO00443 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PIK3C2AO00443 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PIK3C2AO00443 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC21.81■■□□□ 1.08
PIK3C2AO00443 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PIK3C2AO00443 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PIK3C2AO00443 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC21.81■■□□□ 1.08
PIK3C2AO00443 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC21.81■■□□□ 1.08
PIK3C2AO00443 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PIK3C2AO00443 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PIK3C2AO00443 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PIK3C2AO00443 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC21.81■■□□□ 1.08
PIK3C2AO00443 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.8■■□□□ 1.08
PIK3C2AO00443 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PIK3C2AO00443 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PIK3C2AO00443 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PIK3C2AO00443 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PIK3C2AO00443 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PIK3C2AO00443 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PIK3C2AO00443 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PIK3C2AO00443 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PIK3C2AO00443 FO393414.2-201ENST00000405153 598 ntBASIC21.8■■□□□ 1.08
PIK3C2AO00443 RPL13P2-201ENST00000440687 659 ntBASIC21.8■■□□□ 1.08
PIK3C2AO00443 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC21.8■■□□□ 1.08
PIK3C2AO00443 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC21.8■■□□□ 1.08
PIK3C2AO00443 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC21.8■■□□□ 1.08
PIK3C2AO00443 AC015936.2-201ENST00000593177 259 ntBASIC21.8■■□□□ 1.08
PIK3C2AO00443 BRI3BPP1-201ENST00000594224 787 ntBASIC21.8■■□□□ 1.08
PIK3C2AO00443 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC21.8■■□□□ 1.08
PIK3C2AO00443 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
PIK3C2AO00443 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PIK3C2AO00443 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PIK3C2AO00443 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
PIK3C2AO00443 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PIK3C2AO00443 AC018665.1-201ENST00000622927 1362 ntBASIC21.8■■□□□ 1.08
PIK3C2AO00443 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PIK3C2AO00443 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PIK3C2AO00443 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC21.79■■□□□ 1.08
PIK3C2AO00443 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PIK3C2AO00443 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC21.79■■□□□ 1.08
PIK3C2AO00443 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC21.79■■□□□ 1.08
PIK3C2AO00443 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC21.79■■□□□ 1.08
PIK3C2AO00443 NEU3-203ENST00000529024 581 ntTSL 3 BASIC21.79■■□□□ 1.08
PIK3C2AO00443 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC21.79■■□□□ 1.08
PIK3C2AO00443 COX11-210ENST00000639671 696 ntBASIC21.79■■□□□ 1.08
PIK3C2AO00443 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PIK3C2AO00443 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PIK3C2AO00443 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PIK3C2AO00443 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PIK3C2AO00443 RNF216P1-203ENST00000404404 2427 ntBASIC21.79■■□□□ 1.08
PIK3C2AO00443 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PIK3C2AO00443 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC21.79■■□□□ 1.08
PIK3C2AO00443 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PIK3C2AO00443 AMT-232ENST00000636199 1546 ntTSL 5 BASIC21.79■■□□□ 1.08
PIK3C2AO00443 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC21.79■■□□□ 1.08
PIK3C2AO00443 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PIK3C2AO00443 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
PIK3C2AO00443 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PIK3C2AO00443 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC21.79■■□□□ 1.08
PIK3C2AO00443 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PIK3C2AO00443 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC21.79■■□□□ 1.08
PIK3C2AO00443 AC124283.3-201ENST00000570869 594 ntBASIC21.79■■□□□ 1.08
PIK3C2AO00443 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC21.79■■□□□ 1.08
PIK3C2AO00443 MIR6775-201ENST00000617557 69 ntBASIC21.79■■□□□ 1.08
PIK3C2AO00443 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PIK3C2AO00443 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
PIK3C2AO00443 LETM1P2-201ENST00000597330 2178 ntBASIC21.78■■□□□ 1.08
PIK3C2AO00443 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PIK3C2AO00443 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PIK3C2AO00443 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC21.78■■□□□ 1.08
PIK3C2AO00443 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PIK3C2AO00443 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PIK3C2AO00443 AL592424.1-201ENST00000563624 1536 ntBASIC21.78■■□□□ 1.08
PIK3C2AO00443 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC21.78■■□□□ 1.08
PIK3C2AO00443 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PIK3C2AO00443 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC21.78■■□□□ 1.08
PIK3C2AO00443 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PIK3C2AO00443 AC092552.1-201ENST00000547243 906 ntBASIC21.78■■□□□ 1.08
PIK3C2AO00443 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC21.78■■□□□ 1.08
PIK3C2AO00443 AC036164.1-201ENST00000570544 333 ntBASIC21.78■■□□□ 1.08
PIK3C2AO00443 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC21.78■■□□□ 1.08
PIK3C2AO00443 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PIK3C2AO00443 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PIK3C2AO00443 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PIK3C2AO00443 AP001094.4-201ENST00000579008 2176 ntBASIC21.78■■□□□ 1.08
PIK3C2AO00443 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PIK3C2AO00443 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC21.77■■□□□ 1.08
PIK3C2AO00443 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PIK3C2AO00443 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.77■■□□□ 1.08
PIK3C2AO00443 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PIK3C2AO00443 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PIK3C2AO00443 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PIK3C2AO00443 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC21.77■■□□□ 1.08
PIK3C2AO00443 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC21.77■■□□□ 1.08
PIK3C2AO00443 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC21.77■■□□□ 1.08
PIK3C2AO00443 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC21.77■■□□□ 1.08
PIK3C2AO00443 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC21.77■■□□□ 1.08
PIK3C2AO00443 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC21.77■■□□□ 1.08
PIK3C2AO00443 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC21.77■■□□□ 1.08
PIK3C2AO00443 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms