Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX39AO00148 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
DDX39AO00148 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX39AO00148 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX39AO00148 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.61■□□□□ 0.57
DDX39AO00148 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX39AO00148 HLA-A-202ENST00000376806 1854 ntBASIC18.61■□□□□ 0.57
DDX39AO00148 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX39AO00148 AC073439.1-201ENST00000624121 1774 ntBASIC18.61■□□□□ 0.57
DDX39AO00148 GGT4P-201ENST00000623672 1708 ntBASIC18.61■□□□□ 0.57
DDX39AO00148 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
DDX39AO00148 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX39AO00148 AC006538.1-201ENST00000567905 1585 ntBASIC18.61■□□□□ 0.57
DDX39AO00148 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX39AO00148 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX39AO00148 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX39AO00148 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX39AO00148 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX39AO00148 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.61■□□□□ 0.57
DDX39AO00148 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.61■□□□□ 0.57
DDX39AO00148 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX39AO00148 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
DDX39AO00148 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.61■□□□□ 0.57
DDX39AO00148 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.61■□□□□ 0.57
DDX39AO00148 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.61■□□□□ 0.57
DDX39AO00148 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.61■□□□□ 0.57
DDX39AO00148 FLJ38576-201ENST00000623820 2459 ntBASIC18.61■□□□□ 0.57
DDX39AO00148 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
DDX39AO00148 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX39AO00148 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.61■□□□□ 0.57
DDX39AO00148 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX39AO00148 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
DDX39AO00148 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX39AO00148 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX39AO00148 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX39AO00148 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
DDX39AO00148 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
DDX39AO00148 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX39AO00148 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX39AO00148 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.6■□□□□ 0.57
DDX39AO00148 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
DDX39AO00148 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX39AO00148 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.6■□□□□ 0.57
DDX39AO00148 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX39AO00148 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX39AO00148 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX39AO00148 AD000864.1-201ENST00000624076 2295 ntBASIC18.6■□□□□ 0.57
DDX39AO00148 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DDX39AO00148 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX39AO00148 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DDX39AO00148 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX39AO00148 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
DDX39AO00148 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
DDX39AO00148 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.6■□□□□ 0.57
DDX39AO00148 SPDYE14P-201ENST00000442619 822 ntBASIC18.6■□□□□ 0.57
DDX39AO00148 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.6■□□□□ 0.57
DDX39AO00148 AC026150.2-201ENST00000564693 1156 ntBASIC18.6■□□□□ 0.57
DDX39AO00148 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX39AO00148 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX39AO00148 AC093512.1-201ENST00000617969 520 ntBASIC18.6■□□□□ 0.57
DDX39AO00148 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.6■□□□□ 0.57
DDX39AO00148 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.6■□□□□ 0.57
DDX39AO00148 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX39AO00148 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
DDX39AO00148 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX39AO00148 GPAA1P2-202ENST00000606848 1787 ntBASIC18.6■□□□□ 0.57
DDX39AO00148 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX39AO00148 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX39AO00148 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
DDX39AO00148 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX39AO00148 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX39AO00148 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDX39AO00148 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX39AO00148 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX39AO00148 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX39AO00148 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX39AO00148 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX39AO00148 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX39AO00148 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX39AO00148 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.59■□□□□ 0.57
DDX39AO00148 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX39AO00148 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
DDX39AO00148 MIR346-201ENST00000362234 95 ntBASIC18.59■□□□□ 0.57
DDX39AO00148 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX39AO00148 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.59■□□□□ 0.57
DDX39AO00148 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX39AO00148 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.59■□□□□ 0.57
DDX39AO00148 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
DDX39AO00148 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX39AO00148 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.59■□□□□ 0.57
DDX39AO00148 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX39AO00148 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDX39AO00148 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
DDX39AO00148 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDX39AO00148 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDX39AO00148 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX39AO00148 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDX39AO00148 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.59■□□□□ 0.57
DDX39AO00148 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX39AO00148 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms