Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 AL139011.1-202ENST00000642063 584 ntBASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 AC063926.2-201ENST00000623766 1308 ntBASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 AC139713.2-201ENST00000641328 2723 ntBASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 AC105021.1-202ENST00000570572 669 ntBASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 AL035252.4-201ENST00000624174 288 ntBASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 LETM1P2-201ENST00000597330 2178 ntBASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3BA6NDS4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 AL512652.2-201ENST00000625156 1716 ntBASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms