Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV5-4A0A0C4DH59 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV5-4A0A0C4DH59 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV5-4A0A0C4DH59 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV5-4A0A0C4DH59 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV5-4A0A0C4DH59 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV5-4A0A0C4DH59 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRBV5-4A0A0C4DH59 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV5-4A0A0C4DH59 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV5-4A0A0C4DH59 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV5-4A0A0C4DH59 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 AC022145.2-201ENST00000598203 171 ntBASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-4A0A0C4DH59 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 TIMM8BP1-201ENST00000452384 211 ntBASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 AC092865.5-201ENST00000545435 363 ntBASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 AP000842.3-202ENST00000569238 1080 ntBASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 AL596087.1-201ENST00000400979 1969 ntBASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV5-4A0A0C4DH59 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms