Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 PPIH-202ENST00000372549 327 ntTSL 3 BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 KRT17P6-201ENST00000453795 1220 ntBASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 Z69720.1-201ENST00000601483 472 ntBASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV5A0A0B4J249 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 TOB2P1-201ENST00000469761 992 ntBASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 CDV3-207ENST00000508481 661 ntTSL 3 BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 AL031731.1-201ENST00000642131 2094 ntBASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 REXO1L8P-201ENST00000604378 1897 ntBASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV5A0A0B4J249 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 AC126177.1-201ENST00000547829 2218 ntBASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms