Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAI2Q9Y5P3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 GGT3P-204ENST00000453783 1664 ntBASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 MKNK2P1-201ENST00000437526 628 ntBASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 AL096865.1-201ENST00000606796 927 ntBASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAI2Q9Y5P3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 AC016027.1-202ENST00000607927 1699 ntBASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAI2Q9Y5P3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 WASH6P-202ENST00000359512 1437 ntBASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 CROCCP1-201ENST00000426910 5675 ntBASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 AL671277.1-201ENST00000429656 993 ntBASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 CEND1P1-201ENST00000451006 455 ntBASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 RARRES2P8-201ENST00000566335 367 ntBASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 AC027612.4-201ENST00000605371 583 ntBASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 AC020765.3-201ENST00000613051 740 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms