Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 SNORA78-201ENST00000459373 127 ntBASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 AL359075.1-203ENST00000462729 1002 ntBASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 Z83836.1-201ENST00000624605 1642 ntBASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RCL1Q9Y2P8 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 AC006277.1-201ENST00000624348 1610 ntBASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 MMP23A-201ENST00000234610 1017 ntBASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 TSPY15P-201ENST00000457163 923 ntBASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 AC005336.2-201ENST00000593183 939 ntBASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 AC013467.2-201ENST00000605472 835 ntBASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RCL1Q9Y2P8 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms