Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 SIGLEC30P-201ENST00000455569 941 ntBASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 HLA-J-202ENST00000469281 1241 ntBASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 AC079776.4-201ENST00000511039 504 ntBASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 AC107918.4-202ENST00000641623 219 ntBASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.99■□□□□ 0.15
CNOT11Q9UKZ1 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 AL596087.1-201ENST00000400979 1969 ntBASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 TSPY26P-202ENST00000565928 3884 ntBASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 RPS2P28-201ENST00000314255 741 ntBASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.98■□□□□ 0.15
CNOT11Q9UKZ1 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 TUBB8P12-201ENST00000308911 1335 ntBASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 TUBB7P-202ENST00000428444 1305 ntBASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 TUBB8P7-204ENST00000567960 1332 ntBASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT11Q9UKZ1 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms