Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 AC011676.5-201ENST00000624864 2660 ntBASIC14.53□□□□□ -0.08
CDH20Q9HBT6 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 AL645728.1-201ENST00000366221 2101 ntBASIC14.53□□□□□ -0.08
CDH20Q9HBT6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 PDPK2P-202ENST00000562415 1191 ntBASIC14.53□□□□□ -0.08
CDH20Q9HBT6 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.53□□□□□ -0.08
CDH20Q9HBT6 AC068137.2-201ENST00000605408 478 ntBASIC14.53□□□□□ -0.08
CDH20Q9HBT6 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH20Q9HBT6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDH20Q9HBT6 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH20Q9HBT6 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.52□□□□□ -0.08
CDH20Q9HBT6 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH20Q9HBT6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.52□□□□□ -0.08
CDH20Q9HBT6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.08
CDH20Q9HBT6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDH20Q9HBT6 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH20Q9HBT6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
CDH20Q9HBT6 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
CDH20Q9HBT6 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
CDH20Q9HBT6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
CDH20Q9HBT6 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDH20Q9HBT6 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
CDH20Q9HBT6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CDH20Q9HBT6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
CDH20Q9HBT6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CDH20Q9HBT6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH20Q9HBT6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH20Q9HBT6 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH20Q9HBT6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH20Q9HBT6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH20Q9HBT6 HMGA1P7-201ENST00000406908 502 ntBASIC14.52□□□□□ -0.09
CDH20Q9HBT6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.52□□□□□ -0.09
CDH20Q9HBT6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.52□□□□□ -0.09
CDH20Q9HBT6 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH20Q9HBT6 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH20Q9HBT6 AC074386.1-202ENST00000463561 864 ntBASIC14.52□□□□□ -0.09
CDH20Q9HBT6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH20Q9HBT6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms