Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 AC069224.1-201ENST00000566372 1715 ntBASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 AC022532.1-201ENST00000624563 1728 ntBASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 LINC02447-202ENST00000501888 2146 ntBASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHACTR1Q9C0D0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 AC126177.1-201ENST00000547829 2218 ntBASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.86■□□□□ 0.29
PHACTR1Q9C0D0 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 PTCHD3P3-201ENST00000403073 906 ntBASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 AL355877.3-201ENST00000622820 899 ntBASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 AC010491.1-201ENST00000563101 2797 ntBASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHACTR1Q9C0D0 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHACTR1Q9C0D0 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms