Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH11XQ9BZA7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH11XQ9BZA7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH11XQ9BZA7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
PCDH11XQ9BZA7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDH11XQ9BZA7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC21.26■□□□□ 0.99
PCDH11XQ9BZA7 RHOA-206ENST00000454011 889 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDH11XQ9BZA7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDH11XQ9BZA7 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH11XQ9BZA7 MIR6799-201ENST00000620297 69 ntBASIC21.26■□□□□ 0.99
PCDH11XQ9BZA7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH11XQ9BZA7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH11XQ9BZA7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH11XQ9BZA7 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH11XQ9BZA7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH11XQ9BZA7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDH11XQ9BZA7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDH11XQ9BZA7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH11XQ9BZA7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH11XQ9BZA7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH11XQ9BZA7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PCDH11XQ9BZA7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH11XQ9BZA7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH11XQ9BZA7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDH11XQ9BZA7 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH11XQ9BZA7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDH11XQ9BZA7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC21.25■□□□□ 0.99
PCDH11XQ9BZA7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC21.25■□□□□ 0.99
PCDH11XQ9BZA7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDH11XQ9BZA7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDH11XQ9BZA7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC21.25■□□□□ 0.99
PCDH11XQ9BZA7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC21.25■□□□□ 0.99
PCDH11XQ9BZA7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH11XQ9BZA7 WFDC1-204ENST00000613603 549 ntBASIC21.25■□□□□ 0.99
PCDH11XQ9BZA7 BCL2-203ENST00000589955 5011 ntBASIC21.25■□□□□ 0.99
PCDH11XQ9BZA7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH11XQ9BZA7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH11XQ9BZA7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH11XQ9BZA7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH11XQ9BZA7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDH11XQ9BZA7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDH11XQ9BZA7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDH11XQ9BZA7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDH11XQ9BZA7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH11XQ9BZA7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PCDH11XQ9BZA7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
PCDH11XQ9BZA7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDH11XQ9BZA7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDH11XQ9BZA7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDH11XQ9BZA7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PCDH11XQ9BZA7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH11XQ9BZA7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH11XQ9BZA7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
PCDH11XQ9BZA7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH11XQ9BZA7 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
PCDH11XQ9BZA7 AC007389.4-201ENST00000454674 793 ntBASIC21.24■□□□□ 0.99
PCDH11XQ9BZA7 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC21.24■□□□□ 0.99
PCDH11XQ9BZA7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC21.24■□□□□ 0.99
PCDH11XQ9BZA7 AL512343.1-201ENST00000605837 169 ntBASIC21.24■□□□□ 0.99
PCDH11XQ9BZA7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDH11XQ9BZA7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH11XQ9BZA7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
PCDH11XQ9BZA7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH11XQ9BZA7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 HIST3H2BA-201ENST00000436555 524 ntBASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 ORC6-206ENST00000568364 888 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 TMEM261P1-201ENST00000604899 340 ntBASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 CYP4F24P-201ENST00000586049 1580 ntBASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms