Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
NDUFAF3Q9BU61 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 LINC00167-201ENST00000530583 1419 ntBASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 CHCHD2P8-201ENST00000429873 447 ntBASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 TPM4P1-201ENST00000436100 807 ntBASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NDUFAF3Q9BU61 AC005840.4-201ENST00000541242 2494 ntBASIC12.9□□□□□ -0.34
NDUFAF3Q9BU61 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NDUFAF3Q9BU61 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NDUFAF3Q9BU61 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
NDUFAF3Q9BU61 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC12.9□□□□□ -0.34
NDUFAF3Q9BU61 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.9□□□□□ -0.34
NDUFAF3Q9BU61 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NDUFAF3Q9BU61 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.9□□□□□ -0.34
NDUFAF3Q9BU61 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NDUFAF3Q9BU61 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.9□□□□□ -0.34
NDUFAF3Q9BU61 AC132938.6-201ENST00000623828 1655 ntBASIC12.9□□□□□ -0.34
NDUFAF3Q9BU61 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC12.9□□□□□ -0.34
NDUFAF3Q9BU61 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NDUFAF3Q9BU61 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NDUFAF3Q9BU61 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.9□□□□□ -0.34
NDUFAF3Q9BU61 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NDUFAF3Q9BU61 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
NDUFAF3Q9BU61 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC12.9□□□□□ -0.34
NDUFAF3Q9BU61 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
NDUFAF3Q9BU61 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NDUFAF3Q9BU61 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NDUFAF3Q9BU61 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
NDUFAF3Q9BU61 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms