Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
LIMD2Q9BT23 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
LIMD2Q9BT23 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC9.96□□□□□ -0.81
LIMD2Q9BT23 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 CASK-202ENST00000378158 3848 ntTSL 5 BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 BNIP3P18-201ENST00000593976 575 ntBASIC9.96□□□□□ -0.82
LIMD2Q9BT23 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 AL591684.3-201ENST00000605187 298 ntBASIC9.96□□□□□ -0.82
LIMD2Q9BT23 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 AC010331.1-201ENST00000611423 582 ntBASIC9.96□□□□□ -0.82
LIMD2Q9BT23 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 TUBB8P12-201ENST00000308911 1335 ntBASIC9.96□□□□□ -0.82
LIMD2Q9BT23 TUBB7P-202ENST00000428444 1305 ntBASIC9.96□□□□□ -0.82
LIMD2Q9BT23 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 TUBB8P7-204ENST00000567960 1332 ntBASIC9.96□□□□□ -0.82
LIMD2Q9BT23 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC9.96□□□□□ -0.82
LIMD2Q9BT23 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 ADAMTS7P1-201ENST00000613213 4793 ntBASIC9.95□□□□□ -0.82
LIMD2Q9BT23 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 BANP-227ENST00000626016 2144 ntTSL 2 BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 PCDHA14-201ENST00000506751 2298 ntBASIC9.95□□□□□ -0.82
LIMD2Q9BT23 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 AC105917.1-201ENST00000506637 2539 ntBASIC9.95□□□□□ -0.82
LIMD2Q9BT23 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 MIR1224-201ENST00000408193 85 ntBASIC9.95□□□□□ -0.82
LIMD2Q9BT23 COPS8-203ENST00000409334 794 ntTSL 5 BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 IGHV3-47-201ENST00000425060 335 ntBASIC9.95□□□□□ -0.82
LIMD2Q9BT23 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 AP002383.4-201ENST00000442518 975 ntBASIC9.95□□□□□ -0.82
LIMD2Q9BT23 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 PNN-202ENST00000553331 656 ntTSL 3 BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 AP005901.3-202ENST00000581653 237 ntBASIC9.95□□□□□ -0.82
LIMD2Q9BT23 AL121772.3-201ENST00000610840 674 ntBASIC9.95□□□□□ -0.82
LIMD2Q9BT23 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 AC092119.3-201ENST00000612618 583 ntBASIC9.95□□□□□ -0.82
LIMD2Q9BT23 CCNC-219ENST00000627680 896 ntTSL 5 BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms