Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
USB1Q9BQ65 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.91□□□□□ -0.02
USB1Q9BQ65 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.91□□□□□ -0.02
USB1Q9BQ65 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.91□□□□□ -0.02
USB1Q9BQ65 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
USB1Q9BQ65 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
USB1Q9BQ65 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
USB1Q9BQ65 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
USB1Q9BQ65 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
USB1Q9BQ65 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
USB1Q9BQ65 Z97985.1-201ENST00000332270 946 ntBASIC14.91□□□□□ -0.02
USB1Q9BQ65 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.91□□□□□ -0.02
USB1Q9BQ65 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.91□□□□□ -0.02
USB1Q9BQ65 AC023274.1-201ENST00000418278 595 ntBASIC14.91□□□□□ -0.02
USB1Q9BQ65 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.91□□□□□ -0.02
USB1Q9BQ65 AC112482.1-201ENST00000492080 688 ntBASIC14.91□□□□□ -0.02
USB1Q9BQ65 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC14.91□□□□□ -0.02
USB1Q9BQ65 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
USB1Q9BQ65 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
USB1Q9BQ65 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC14.91□□□□□ -0.02
USB1Q9BQ65 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
USB1Q9BQ65 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.91□□□□□ -0.02
USB1Q9BQ65 AC005412.3-201ENST00000580309 715 ntBASIC14.91□□□□□ -0.02
USB1Q9BQ65 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.91□□□□□ -0.02
USB1Q9BQ65 AC108673.2-201ENST00000608909 565 ntBASIC14.91□□□□□ -0.02
USB1Q9BQ65 AC010507.1-201ENST00000633895 436 ntBASIC14.91□□□□□ -0.02
USB1Q9BQ65 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.91□□□□□ -0.02
USB1Q9BQ65 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
USB1Q9BQ65 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.91□□□□□ -0.02
USB1Q9BQ65 PCDHB19P-201ENST00000570871 2371 ntBASIC14.91□□□□□ -0.02
USB1Q9BQ65 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
USB1Q9BQ65 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
USB1Q9BQ65 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.91□□□□□ -0.02
USB1Q9BQ65 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
USB1Q9BQ65 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
USB1Q9BQ65 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
USB1Q9BQ65 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
USB1Q9BQ65 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
USB1Q9BQ65 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
USB1Q9BQ65 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
USB1Q9BQ65 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
USB1Q9BQ65 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
USB1Q9BQ65 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
USB1Q9BQ65 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
USB1Q9BQ65 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
USB1Q9BQ65 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
USB1Q9BQ65 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
USB1Q9BQ65 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.9□□□□□ -0.02
USB1Q9BQ65 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
USB1Q9BQ65 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
USB1Q9BQ65 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
USB1Q9BQ65 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
USB1Q9BQ65 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
USB1Q9BQ65 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
USB1Q9BQ65 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.9□□□□□ -0.02
USB1Q9BQ65 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
USB1Q9BQ65 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.9□□□□□ -0.02
USB1Q9BQ65 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
USB1Q9BQ65 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
USB1Q9BQ65 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
USB1Q9BQ65 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.9□□□□□ -0.02
USB1Q9BQ65 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
USB1Q9BQ65 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
USB1Q9BQ65 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.9□□□□□ -0.02
USB1Q9BQ65 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.9□□□□□ -0.02
USB1Q9BQ65 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.9□□□□□ -0.02
USB1Q9BQ65 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
USB1Q9BQ65 KRT19P2-202ENST00000557173 1012 ntBASIC14.9□□□□□ -0.02
USB1Q9BQ65 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.9□□□□□ -0.02
USB1Q9BQ65 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.9□□□□□ -0.02
USB1Q9BQ65 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.9□□□□□ -0.02
USB1Q9BQ65 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
USB1Q9BQ65 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
USB1Q9BQ65 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
USB1Q9BQ65 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.9□□□□□ -0.02
USB1Q9BQ65 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
USB1Q9BQ65 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.9□□□□□ -0.02
USB1Q9BQ65 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
USB1Q9BQ65 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
USB1Q9BQ65 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.9□□□□□ -0.02
USB1Q9BQ65 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
USB1Q9BQ65 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
USB1Q9BQ65 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
USB1Q9BQ65 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
USB1Q9BQ65 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
USB1Q9BQ65 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC14.9□□□□□ -0.02
USB1Q9BQ65 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
USB1Q9BQ65 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
USB1Q9BQ65 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms