Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 ARSEP1-201ENST00000420443 635 ntBASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 KRT17P7-201ENST00000451704 1104 ntBASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 INE1-201ENST00000456273 945 ntBASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 SRD5A3P1-201ENST00000603021 949 ntBASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LRRC3BQ96PB8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC3BQ96PB8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC3BQ96PB8 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC3BQ96PB8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRC3BQ96PB8 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC3BQ96PB8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
LRRC3BQ96PB8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LRRC3BQ96PB8 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
LRRC3BQ96PB8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LRRC3BQ96PB8 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC3BQ96PB8 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.78■□□□□ 0.28
LRRC3BQ96PB8 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC3BQ96PB8 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.78■□□□□ 0.28
LRRC3BQ96PB8 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.78■□□□□ 0.28
LRRC3BQ96PB8 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
LRRC3BQ96PB8 AC132938.2-201ENST00000579188 680 ntBASIC16.78■□□□□ 0.28
LRRC3BQ96PB8 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRC3BQ96PB8 AL591163.1-201ENST00000641757 987 ntBASIC16.78■□□□□ 0.28
LRRC3BQ96PB8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC3BQ96PB8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC3BQ96PB8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.78■□□□□ 0.28
LRRC3BQ96PB8 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC3BQ96PB8 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC3BQ96PB8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC3BQ96PB8 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC3BQ96PB8 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 AC005915.1-201ENST00000624912 2018 ntBASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 AC098614.1-201ENST00000368528 745 ntBASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 AL109936.8-201ENST00000641772 604 ntBASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
LRRC3BQ96PB8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms