Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 FO538757.1-201ENST00000623083 1397 ntBASIC13.5□□□□□ -0.25
ZNF48Q96MX3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 TREML5P-201ENST00000421694 576 ntBASIC13.5□□□□□ -0.25
ZNF48Q96MX3 AC107890.1-201ENST00000422478 521 ntBASIC13.5□□□□□ -0.25
ZNF48Q96MX3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 INGX-202ENST00000489074 768 ntBASIC13.5□□□□□ -0.25
ZNF48Q96MX3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 AC087641.1-201ENST00000557561 1021 ntBASIC13.5□□□□□ -0.25
ZNF48Q96MX3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 AC016027.1-202ENST00000607927 1699 ntBASIC13.5□□□□□ -0.25
ZNF48Q96MX3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF48Q96MX3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 AC060834.1-201ENST00000443027 2032 ntBASIC13.49□□□□□ -0.25
ZNF48Q96MX3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 BASP1P1-201ENST00000430708 665 ntBASIC13.49□□□□□ -0.25
ZNF48Q96MX3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 AP000842.3-202ENST00000569238 1080 ntBASIC13.49□□□□□ -0.25
ZNF48Q96MX3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 MPDU1-223ENST00000582151 728 ntBASIC13.49□□□□□ -0.25
ZNF48Q96MX3 AC027307.2-201ENST00000591252 911 ntBASIC13.49□□□□□ -0.25
ZNF48Q96MX3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 AC131009.4-201ENST00000624048 1740 ntBASIC13.49□□□□□ -0.25
ZNF48Q96MX3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms