Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 AC093909.1-201ENST00000504731 1122 ntBASIC15.33■□□□□ 0.04
CNOT9Q92600 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.33■□□□□ 0.04
CNOT9Q92600 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.33■□□□□ 0.04
CNOT9Q92600 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
CNOT9Q92600 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.33■□□□□ 0.04
CNOT9Q92600 AP001350.2-201ENST00000625104 1094 ntBASIC15.33■□□□□ 0.04
CNOT9Q92600 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.33■□□□□ 0.04
CNOT9Q92600 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNOT9Q92600 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.33■□□□□ 0.04
CNOT9Q92600 AC103702.1-201ENST00000548801 2630 ntBASIC15.33■□□□□ 0.04
CNOT9Q92600 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.33■□□□□ 0.04
CNOT9Q92600 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CNOT9Q92600 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CNOT9Q92600 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNOT9Q92600 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.33■□□□□ 0.04
CNOT9Q92600 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNOT9Q92600 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.33■□□□□ 0.04
CNOT9Q92600 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNOT9Q92600 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.33■□□□□ 0.04
CNOT9Q92600 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.33■□□□□ 0.04
CNOT9Q92600 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.33■□□□□ 0.04
CNOT9Q92600 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.33■□□□□ 0.04
CNOT9Q92600 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNOT9Q92600 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CNOT9Q92600 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNOT9Q92600 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNOT9Q92600 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CNOT9Q92600 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNOT9Q92600 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CNOT9Q92600 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.33■□□□□ 0.04
CNOT9Q92600 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CNOT9Q92600 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNOT9Q92600 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CNOT9Q92600 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CNOT9Q92600 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT9Q92600 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT9Q92600 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CNOT9Q92600 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CNOT9Q92600 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT9Q92600 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT9Q92600 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.32■□□□□ 0.04
CNOT9Q92600 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
CNOT9Q92600 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT9Q92600 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.32■□□□□ 0.04
CNOT9Q92600 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.32■□□□□ 0.04
CNOT9Q92600 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.32■□□□□ 0.04
CNOT9Q92600 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.32■□□□□ 0.04
CNOT9Q92600 PRSS29P-201ENST00000440800 595 ntBASIC15.32■□□□□ 0.04
CNOT9Q92600 AC009947.1-201ENST00000444350 727 ntBASIC15.32■□□□□ 0.04
CNOT9Q92600 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.32■□□□□ 0.04
CNOT9Q92600 RNA5SP415-201ENST00000517246 115 ntBASIC15.32■□□□□ 0.04
CNOT9Q92600 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.32■□□□□ 0.04
CNOT9Q92600 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.32■□□□□ 0.04
CNOT9Q92600 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CNOT9Q92600 AL662844.1-201ENST00000546340 181 ntBASIC15.32■□□□□ 0.04
CNOT9Q92600 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.32■□□□□ 0.04
CNOT9Q92600 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.32■□□□□ 0.04
CNOT9Q92600 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.32■□□□□ 0.04
CNOT9Q92600 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.32■□□□□ 0.04
CNOT9Q92600 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.32■□□□□ 0.04
CNOT9Q92600 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.32■□□□□ 0.04
CNOT9Q92600 HLA-A-201ENST00000376802 1334 ntBASIC15.32■□□□□ 0.04
CNOT9Q92600 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CNOT9Q92600 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT9Q92600 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT9Q92600 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.32■□□□□ 0.04
CNOT9Q92600 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT9Q92600 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT9Q92600 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT9Q92600 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT9Q92600 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT9Q92600 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CNOT9Q92600 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT9Q92600 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT9Q92600 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT9Q92600 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNOT9Q92600 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.32■□□□□ 0.04
CNOT9Q92600 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.32■□□□□ 0.04
CNOT9Q92600 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.31■□□□□ 0.04
CNOT9Q92600 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CNOT9Q92600 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT9Q92600 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CNOT9Q92600 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT9Q92600 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CNOT9Q92600 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT9Q92600 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT9Q92600 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CNOT9Q92600 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CNOT9Q92600 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT9Q92600 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT9Q92600 CYP2T1P-202ENST00000641596 2535 ntBASIC15.31■□□□□ 0.04
CNOT9Q92600 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CNOT9Q92600 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT9Q92600 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT9Q92600 CXCL1P1-201ENST00000502804 216 ntBASIC15.31■□□□□ 0.04
CNOT9Q92600 IGHV3-22-201ENST00000520721 359 ntBASIC15.31■□□□□ 0.04
CNOT9Q92600 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.31■□□□□ 0.04
CNOT9Q92600 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.31■□□□□ 0.04
CNOT9Q92600 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.31■□□□□ 0.04
CNOT9Q92600 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms