Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 AC097493.3-201ENST00000509725 367 ntBASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 AC069120.2-201ENST00000524091 540 ntBASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 AC011270.2-201ENST00000624293 2550 ntBASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
SHKBP1Q8TBC3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 AC092580.3-201ENST00000430932 139 ntBASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 AC002472.2-201ENST00000442739 958 ntBASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 AC105233.2-201ENST00000523697 349 ntBASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 AF228730.5-201ENST00000530288 346 ntBASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 RN7SL204P-201ENST00000582831 262 ntBASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.38■□□□□ 0.37
SHKBP1Q8TBC3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 KRT18P34-201ENST00000488218 1270 ntBASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 AC124947.2-201ENST00000547118 1133 ntBASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 AC073389.1-201ENST00000595595 795 ntBASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.37■□□□□ 0.37
SHKBP1Q8TBC3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms