Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 RNF216P1-203ENST00000404404 2427 ntBASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 AC092384.3-202ENST00000564646 2873 ntBASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 RPS2P1-201ENST00000434010 821 ntBASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 PRYP5-201ENST00000451909 266 ntBASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 RNPS1P1-201ENST00000507437 918 ntBASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CFAP61Q8NHU2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CFAP61Q8NHU2 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CFAP61Q8NHU2 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 AC126177.1-201ENST00000547829 2218 ntBASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CFAP61Q8NHU2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CFAP61Q8NHU2 FAM45BP-202ENST00000592932 1624 ntBASIC16.88■□□□□ 0.29
CFAP61Q8NHU2 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.88■□□□□ 0.29
CFAP61Q8NHU2 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CFAP61Q8NHU2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.88■□□□□ 0.29
CFAP61Q8NHU2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.88■□□□□ 0.29
CFAP61Q8NHU2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CFAP61Q8NHU2 AC078925.2-201ENST00000624013 1973 ntBASIC16.88■□□□□ 0.29
CFAP61Q8NHU2 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.88■□□□□ 0.29
CFAP61Q8NHU2 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CFAP61Q8NHU2 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CFAP61Q8NHU2 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CFAP61Q8NHU2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CFAP61Q8NHU2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CFAP61Q8NHU2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.88■□□□□ 0.29
CFAP61Q8NHU2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CFAP61Q8NHU2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.88■□□□□ 0.29
CFAP61Q8NHU2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.88■□□□□ 0.29
CFAP61Q8NHU2 AF186996.4-201ENST00000467186 377 ntBASIC16.88■□□□□ 0.29
CFAP61Q8NHU2 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.88■□□□□ 0.29
CFAP61Q8NHU2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.88■□□□□ 0.29
CFAP61Q8NHU2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.88■□□□□ 0.29
CFAP61Q8NHU2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms