Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 FADS2-205ENST00000517839 469 ntTSL 3 BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 QPRT-203ENST00000562473 579 ntTSL 3 BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 AL512652.2-201ENST00000625156 1716 ntBASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 APOC3-202ENST00000375345 604 ntTSL 5 BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
VPS13BQ7Z7G8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 FO681548.1-201ENST00000455617 1132 ntBASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 AC108725.1-201ENST00000495472 409 ntBASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 AMT-232ENST00000636199 1546 ntTSL 5 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 FXNP2-201ENST00000411625 547 ntBASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 AC091271.1-201ENST00000611877 1162 ntBASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 PCDHB18P-201ENST00000524813 2368 ntBASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 MIR663B-201ENST00000408361 115 ntBASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 AC025048.3-201ENST00000590609 569 ntBASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 WFDC1-204ENST00000613603 549 ntBASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 RETN-203ENST00000629642 400 ntTSL 5 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 AL645608.8-201ENST00000606034 2086 ntBASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 AC011676.5-201ENST00000624864 2660 ntBASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
VPS13BQ7Z7G8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms