Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP50Q70EL3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP50Q70EL3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP50Q70EL3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP50Q70EL3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.25■□□□□ 0.67
USP50Q70EL3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP50Q70EL3 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC19.25■□□□□ 0.67
USP50Q70EL3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
USP50Q70EL3 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP50Q70EL3 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP50Q70EL3 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP50Q70EL3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP50Q70EL3 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP50Q70EL3 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP50Q70EL3 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
USP50Q70EL3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
USP50Q70EL3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC19.25■□□□□ 0.67
USP50Q70EL3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC19.25■□□□□ 0.67
USP50Q70EL3 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP50Q70EL3 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC19.25■□□□□ 0.67
USP50Q70EL3 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC19.25■□□□□ 0.67
USP50Q70EL3 DUX4L45-201ENST00000566406 1057 ntBASIC19.25■□□□□ 0.67
USP50Q70EL3 RN7SL560P-201ENST00000577943 264 ntBASIC19.25■□□□□ 0.67
USP50Q70EL3 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP50Q70EL3 AC091271.1-201ENST00000611877 1162 ntBASIC19.25■□□□□ 0.67
USP50Q70EL3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC19.25■□□□□ 0.67
USP50Q70EL3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
USP50Q70EL3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP50Q70EL3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP50Q70EL3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP50Q70EL3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
USP50Q70EL3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP50Q70EL3 AC098818.2-201ENST00000564925 2320 ntBASIC19.24■□□□□ 0.67
USP50Q70EL3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP50Q70EL3 AC006538.1-201ENST00000567905 1585 ntBASIC19.24■□□□□ 0.67
USP50Q70EL3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.24■□□□□ 0.67
USP50Q70EL3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP50Q70EL3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP50Q70EL3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP50Q70EL3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP50Q70EL3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
USP50Q70EL3 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP50Q70EL3 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC19.24■□□□□ 0.67
USP50Q70EL3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.24■□□□□ 0.67
USP50Q70EL3 FAM86LP-201ENST00000478302 853 ntBASIC19.24■□□□□ 0.67
USP50Q70EL3 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP50Q70EL3 RIT1-205ENST00000539040 919 ntTSL 2 BASIC19.24■□□□□ 0.67
USP50Q70EL3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC19.24■□□□□ 0.67
USP50Q70EL3 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC19.24■□□□□ 0.67
USP50Q70EL3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP50Q70EL3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
USP50Q70EL3 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
USP50Q70EL3 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP50Q70EL3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP50Q70EL3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
USP50Q70EL3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.24■□□□□ 0.67
USP50Q70EL3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.24■□□□□ 0.67
USP50Q70EL3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP50Q70EL3 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP50Q70EL3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP50Q70EL3 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP50Q70EL3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP50Q70EL3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
USP50Q70EL3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
USP50Q70EL3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
USP50Q70EL3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP50Q70EL3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
USP50Q70EL3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
USP50Q70EL3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP50Q70EL3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.23■□□□□ 0.67
USP50Q70EL3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.23■□□□□ 0.67
USP50Q70EL3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP50Q70EL3 AL136982.4-201ENST00000437689 1740 ntBASIC19.23■□□□□ 0.67
USP50Q70EL3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
USP50Q70EL3 AL512652.2-201ENST00000625156 1716 ntBASIC19.23■□□□□ 0.67
USP50Q70EL3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP50Q70EL3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.23■□□□□ 0.67
USP50Q70EL3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
USP50Q70EL3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
USP50Q70EL3 AC016694.1-201ENST00000434179 700 ntBASIC19.23■□□□□ 0.67
USP50Q70EL3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC19.23■□□□□ 0.67
USP50Q70EL3 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC19.23■□□□□ 0.67
USP50Q70EL3 FTH1P14-201ENST00000482930 551 ntBASIC19.23■□□□□ 0.67
USP50Q70EL3 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC19.23■□□□□ 0.67
USP50Q70EL3 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP50Q70EL3 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC19.23■□□□□ 0.67
USP50Q70EL3 AC009542.2-202ENST00000619004 1067 ntBASIC19.23■□□□□ 0.67
USP50Q70EL3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP50Q70EL3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
USP50Q70EL3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP50Q70EL3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
USP50Q70EL3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
USP50Q70EL3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
USP50Q70EL3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
USP50Q70EL3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP50Q70EL3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.22■□□□□ 0.67
USP50Q70EL3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP50Q70EL3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP50Q70EL3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP50Q70EL3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms