Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 DOC2GP-204ENST00000639052 2548 ntBASIC17.43■□□□□ 0.38
PTPN20Q4JDL3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 MCCD1P2-201ENST00000423228 335 ntBASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 PMS2P7-201ENST00000506558 1336 ntBASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN20Q4JDL3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 AC002056.1-201ENST00000395613 760 ntBASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 AC004832.2-201ENST00000426397 482 ntBASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 POU5F1P6-201ENST00000466990 990 ntBASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 AC112191.1-201ENST00000523689 701 ntBASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms