Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP1Q04837 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.07□□□□□ -0.16
SSBP1Q04837 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.07□□□□□ -0.16
SSBP1Q04837 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
SSBP1Q04837 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.07□□□□□ -0.16
SSBP1Q04837 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.07□□□□□ -0.16
SSBP1Q04837 AC090616.6-201ENST00000582640 721 ntBASIC14.07□□□□□ -0.16
SSBP1Q04837 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.07□□□□□ -0.16
SSBP1Q04837 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SSBP1Q04837 AC124864.1-201ENST00000623408 392 ntBASIC14.07□□□□□ -0.16
SSBP1Q04837 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.07□□□□□ -0.16
SSBP1Q04837 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP1Q04837 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP1Q04837 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SSBP1Q04837 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.07□□□□□ -0.16
SSBP1Q04837 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP1Q04837 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
SSBP1Q04837 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP1Q04837 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP1Q04837 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP1Q04837 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP1Q04837 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP1Q04837 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.07□□□□□ -0.16
SSBP1Q04837 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP1Q04837 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.07□□□□□ -0.16
SSBP1Q04837 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.07□□□□□ -0.16
SSBP1Q04837 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP1Q04837 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.07□□□□□ -0.16
SSBP1Q04837 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP1Q04837 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
SSBP1Q04837 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SSBP1Q04837 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP1Q04837 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SSBP1Q04837 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.07□□□□□ -0.16
SSBP1Q04837 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.07□□□□□ -0.16
SSBP1Q04837 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP1Q04837 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP1Q04837 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SSBP1Q04837 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
SSBP1Q04837 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
SSBP1Q04837 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP1Q04837 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.06□□□□□ -0.16
SSBP1Q04837 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.06□□□□□ -0.16
SSBP1Q04837 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.06□□□□□ -0.16
SSBP1Q04837 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP1Q04837 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP1Q04837 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP1Q04837 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP1Q04837 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP1Q04837 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP1Q04837 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.06□□□□□ -0.16
SSBP1Q04837 AL845331.1-201ENST00000424978 1190 ntBASIC14.06□□□□□ -0.16
SSBP1Q04837 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.06□□□□□ -0.16
SSBP1Q04837 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP1Q04837 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.06□□□□□ -0.16
SSBP1Q04837 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.06□□□□□ -0.16
SSBP1Q04837 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP1Q04837 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.06□□□□□ -0.16
SSBP1Q04837 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.06□□□□□ -0.16
SSBP1Q04837 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP1Q04837 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP1Q04837 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.06□□□□□ -0.16
SSBP1Q04837 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP1Q04837 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP1Q04837 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP1Q04837 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP1Q04837 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP1Q04837 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.06□□□□□ -0.16
SSBP1Q04837 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.06□□□□□ -0.16
SSBP1Q04837 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP1Q04837 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP1Q04837 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP1Q04837 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SSBP1Q04837 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.05□□□□□ -0.16
SSBP1Q04837 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP1Q04837 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP1Q04837 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP1Q04837 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP1Q04837 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP1Q04837 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SSBP1Q04837 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP1Q04837 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP1Q04837 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP1Q04837 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.05□□□□□ -0.16
SSBP1Q04837 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP1Q04837 AL109954.1-202ENST00000564051 2148 ntBASIC14.05□□□□□ -0.16
SSBP1Q04837 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP1Q04837 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP1Q04837 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP1Q04837 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.05□□□□□ -0.16
SSBP1Q04837 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP1Q04837 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP1Q04837 LINC00982-205ENST00000420957 435 ntBASIC14.05□□□□□ -0.16
SSBP1Q04837 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.05□□□□□ -0.16
SSBP1Q04837 HOMER2P1-201ENST00000455653 964 ntBASIC14.05□□□□□ -0.16
SSBP1Q04837 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.05□□□□□ -0.16
SSBP1Q04837 MPDU1-223ENST00000582151 728 ntBASIC14.05□□□□□ -0.16
SSBP1Q04837 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SSBP1Q04837 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.05□□□□□ -0.16
SSBP1Q04837 AC011558.1-201ENST00000623459 338 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms