Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBA52P62987 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBA52P62987 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBA52P62987 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBA52P62987 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
UBA52P62987 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBA52P62987 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBA52P62987 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBA52P62987 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBA52P62987 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
UBA52P62987 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
UBA52P62987 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.4□□□□□ -0.1
UBA52P62987 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBA52P62987 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBA52P62987 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
UBA52P62987 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
UBA52P62987 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
UBA52P62987 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.4□□□□□ -0.1
UBA52P62987 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBA52P62987 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBA52P62987 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.4□□□□□ -0.1
UBA52P62987 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
UBA52P62987 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
UBA52P62987 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.4□□□□□ -0.1
UBA52P62987 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.4□□□□□ -0.1
UBA52P62987 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
UBA52P62987 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBA52P62987 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBA52P62987 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.4□□□□□ -0.1
UBA52P62987 AC021087.4-201ENST00000563761 564 ntBASIC14.4□□□□□ -0.1
UBA52P62987 AC145285.3-201ENST00000564603 959 ntBASIC14.4□□□□□ -0.1
UBA52P62987 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.4□□□□□ -0.1
UBA52P62987 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBA52P62987 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBA52P62987 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBA52P62987 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBA52P62987 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBA52P62987 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBA52P62987 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBA52P62987 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.4□□□□□ -0.1
UBA52P62987 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.4□□□□□ -0.1
UBA52P62987 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.4□□□□□ -0.1
UBA52P62987 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBA52P62987 FAM45BP-202ENST00000592932 1624 ntBASIC14.4□□□□□ -0.1
UBA52P62987 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBA52P62987 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBA52P62987 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBA52P62987 AC104109.2-201ENST00000602919 1418 ntBASIC14.4□□□□□ -0.1
UBA52P62987 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.4□□□□□ -0.1
UBA52P62987 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.4□□□□□ -0.1
UBA52P62987 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.4□□□□□ -0.1
UBA52P62987 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBA52P62987 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
UBA52P62987 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.39□□□□□ -0.11
UBA52P62987 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBA52P62987 AC144831.1-201ENST00000573312 2656 ntBASIC14.39□□□□□ -0.11
UBA52P62987 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBA52P62987 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
UBA52P62987 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.39□□□□□ -0.11
UBA52P62987 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.39□□□□□ -0.11
UBA52P62987 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.39□□□□□ -0.11
UBA52P62987 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.39□□□□□ -0.11
UBA52P62987 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBA52P62987 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBA52P62987 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.39□□□□□ -0.11
UBA52P62987 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
UBA52P62987 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBA52P62987 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBA52P62987 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBA52P62987 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBA52P62987 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBA52P62987 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBA52P62987 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.39□□□□□ -0.11
UBA52P62987 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.39□□□□□ -0.11
UBA52P62987 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
UBA52P62987 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.39□□□□□ -0.11
UBA52P62987 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.39□□□□□ -0.11
UBA52P62987 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.39□□□□□ -0.11
UBA52P62987 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
UBA52P62987 AC027601.4-201ENST00000611259 610 ntBASIC14.39□□□□□ -0.11
UBA52P62987 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.39□□□□□ -0.11
UBA52P62987 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
UBA52P62987 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
UBA52P62987 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
UBA52P62987 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
UBA52P62987 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBA52P62987 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBA52P62987 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
UBA52P62987 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBA52P62987 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBA52P62987 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBA52P62987 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBA52P62987 AP005117.1-201ENST00000584346 1413 ntBASIC14.39□□□□□ -0.11
UBA52P62987 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBA52P62987 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBA52P62987 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBA52P62987 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
UBA52P62987 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBA52P62987 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBA52P62987 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms