Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CMC4P56277 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CMC4P56277 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CMC4P56277 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.34□□□□□ -0.43
CMC4P56277 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CMC4P56277 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CMC4P56277 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
CMC4P56277 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
CMC4P56277 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CMC4P56277 GPAA1P2-202ENST00000606848 1787 ntBASIC12.34□□□□□ -0.43
CMC4P56277 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.34□□□□□ -0.43
CMC4P56277 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
CMC4P56277 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.34□□□□□ -0.43
CMC4P56277 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.34□□□□□ -0.43
CMC4P56277 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 AC254562.1-201ENST00000417586 456 ntBASIC12.34□□□□□ -0.43
CMC4P56277 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
CMC4P56277 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.34□□□□□ -0.43
CMC4P56277 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.34□□□□□ -0.43
CMC4P56277 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.34□□□□□ -0.43
CMC4P56277 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.34□□□□□ -0.43
CMC4P56277 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
CMC4P56277 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.34□□□□□ -0.43
CMC4P56277 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.34□□□□□ -0.43
CMC4P56277 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.34□□□□□ -0.43
CMC4P56277 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC12.34□□□□□ -0.43
CMC4P56277 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.34□□□□□ -0.43
CMC4P56277 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.34□□□□□ -0.43
CMC4P56277 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.34□□□□□ -0.43
CMC4P56277 AC092902.6-201ENST00000641783 218 ntBASIC12.34□□□□□ -0.43
CMC4P56277 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC12.34□□□□□ -0.43
CMC4P56277 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC12.34□□□□□ -0.43
CMC4P56277 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC12.34□□□□□ -0.43
CMC4P56277 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC12.34□□□□□ -0.43
CMC4P56277 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC12.34□□□□□ -0.43
CMC4P56277 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CMC4P56277 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC12.34□□□□□ -0.43
CMC4P56277 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CMC4P56277 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CMC4P56277 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CMC4P56277 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.33□□□□□ -0.44
CMC4P56277 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CMC4P56277 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CMC4P56277 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CMC4P56277 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CMC4P56277 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC12.33□□□□□ -0.44
CMC4P56277 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC12.33□□□□□ -0.44
CMC4P56277 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CMC4P56277 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
CMC4P56277 OS9-205ENST00000413095 1660 ntTSL 2 BASIC12.33□□□□□ -0.44
CMC4P56277 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.33□□□□□ -0.44
CMC4P56277 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CMC4P56277 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CMC4P56277 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC12.33□□□□□ -0.44
CMC4P56277 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CMC4P56277 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CMC4P56277 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.33□□□□□ -0.44
CMC4P56277 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.33□□□□□ -0.44
CMC4P56277 AL355306.1-201ENST00000415580 579 ntBASIC12.33□□□□□ -0.44
CMC4P56277 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.33□□□□□ -0.44
CMC4P56277 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.33□□□□□ -0.44
CMC4P56277 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.33□□□□□ -0.44
CMC4P56277 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.33□□□□□ -0.44
CMC4P56277 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.33□□□□□ -0.44
CMC4P56277 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.33□□□□□ -0.44
CMC4P56277 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.33□□□□□ -0.44
CMC4P56277 AP000344.2-201ENST00000512987 629 ntBASIC12.33□□□□□ -0.44
CMC4P56277 DHDH-204ENST00000523250 634 ntTSL 5 BASIC12.33□□□□□ -0.44
CMC4P56277 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CMC4P56277 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CMC4P56277 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.33□□□□□ -0.44
CMC4P56277 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms