Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.59■□□□□ 0.41
CACNA2D1P54289 WASH6P-202ENST00000359512 1437 ntBASIC17.59■□□□□ 0.41
CACNA2D1P54289 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CACNA2D1P54289 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CACNA2D1P54289 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CACNA2D1P54289 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.59■□□□□ 0.41
CACNA2D1P54289 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CACNA2D1P54289 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CACNA2D1P54289 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.59■□□□□ 0.41
CACNA2D1P54289 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CACNA2D1P54289 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.59■□□□□ 0.41
CACNA2D1P54289 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CACNA2D1P54289 AC069335.1-201ENST00000489972 472 ntBASIC17.59■□□□□ 0.41
CACNA2D1P54289 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.59■□□□□ 0.41
CACNA2D1P54289 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CACNA2D1P54289 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CACNA2D1P54289 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CACNA2D1P54289 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CACNA2D1P54289 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CACNA2D1P54289 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.59■□□□□ 0.41
CACNA2D1P54289 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CACNA2D1P54289 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.58■□□□□ 0.41
CACNA2D1P54289 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CACNA2D1P54289 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
CACNA2D1P54289 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CACNA2D1P54289 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CACNA2D1P54289 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CACNA2D1P54289 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.58■□□□□ 0.41
CACNA2D1P54289 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CACNA2D1P54289 KRT8P39-201ENST00000396270 1433 ntBASIC17.58■□□□□ 0.41
CACNA2D1P54289 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CACNA2D1P54289 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.58■□□□□ 0.4
CACNA2D1P54289 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CACNA2D1P54289 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.58■□□□□ 0.4
CACNA2D1P54289 AKAP8P1-201ENST00000434743 1349 ntBASIC17.58■□□□□ 0.4
CACNA2D1P54289 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.58■□□□□ 0.4
CACNA2D1P54289 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.58■□□□□ 0.4
CACNA2D1P54289 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CACNA2D1P54289 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CACNA2D1P54289 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CACNA2D1P54289 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CACNA2D1P54289 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CACNA2D1P54289 FAM58DP-201ENST00000428076 619 ntBASIC17.58■□□□□ 0.4
CACNA2D1P54289 METTL21AP1-201ENST00000438852 635 ntBASIC17.58■□□□□ 0.4
CACNA2D1P54289 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.58■□□□□ 0.4
CACNA2D1P54289 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.58■□□□□ 0.4
CACNA2D1P54289 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.58■□□□□ 0.4
CACNA2D1P54289 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.58■□□□□ 0.4
CACNA2D1P54289 FAM86C2P-203ENST00000528684 1004 ntBASIC17.58■□□□□ 0.4
CACNA2D1P54289 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CACNA2D1P54289 LINC01225-203ENST00000563550 1244 ntBASIC17.58■□□□□ 0.4
CACNA2D1P54289 AL138918.1-201ENST00000568306 659 ntBASIC17.58■□□□□ 0.4
CACNA2D1P54289 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.58■□□□□ 0.4
CACNA2D1P54289 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.58■□□□□ 0.4
CACNA2D1P54289 AC004835.2-201ENST00000603762 682 ntBASIC17.58■□□□□ 0.4
CACNA2D1P54289 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CACNA2D1P54289 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.58■□□□□ 0.4
CACNA2D1P54289 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.58■□□□□ 0.4
CACNA2D1P54289 AC106886.4-201ENST00000623557 2502 ntBASIC17.58■□□□□ 0.4
CACNA2D1P54289 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.58■□□□□ 0.4
CACNA2D1P54289 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CACNA2D1P54289 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CACNA2D1P54289 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.58■□□□□ 0.4
CACNA2D1P54289 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CACNA2D1P54289 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
CACNA2D1P54289 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CACNA2D1P54289 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CACNA2D1P54289 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CACNA2D1P54289 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CACNA2D1P54289 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CACNA2D1P54289 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.57■□□□□ 0.4
CACNA2D1P54289 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.57■□□□□ 0.4
CACNA2D1P54289 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CACNA2D1P54289 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CACNA2D1P54289 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.57■□□□□ 0.4
CACNA2D1P54289 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CACNA2D1P54289 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CACNA2D1P54289 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CACNA2D1P54289 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CACNA2D1P54289 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.57■□□□□ 0.4
CACNA2D1P54289 AL627223.1-201ENST00000416693 442 ntBASIC17.57■□□□□ 0.4
CACNA2D1P54289 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.57■□□□□ 0.4
CACNA2D1P54289 AL592309.1-201ENST00000443127 649 ntBASIC17.57■□□□□ 0.4
CACNA2D1P54289 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.57■□□□□ 0.4
CACNA2D1P54289 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.57■□□□□ 0.4
CACNA2D1P54289 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.57■□□□□ 0.4
CACNA2D1P54289 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CACNA2D1P54289 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.57■□□□□ 0.4
CACNA2D1P54289 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CACNA2D1P54289 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.57■□□□□ 0.4
CACNA2D1P54289 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.57■□□□□ 0.4
CACNA2D1P54289 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.57■□□□□ 0.4
CACNA2D1P54289 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.57■□□□□ 0.4
CACNA2D1P54289 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CACNA2D1P54289 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.57■□□□□ 0.4
CACNA2D1P54289 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CACNA2D1P54289 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CACNA2D1P54289 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CACNA2D1P54289 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CACNA2D1P54289 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms